RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 SCARF2Q96GP6 870 aaPredicted RBP19.16■□□□□ 0.66
SH3BP2-220ENST00000511663 CCDC74BQ96LY2 380 aa19.16■□□□□ 0.66
SH3BP2-220ENST00000511663 CTTNBP2NLQ9P2B4 639 aa19.16■□□□□ 0.66
SH3BP2-220ENST00000511663 LCMT1Q9UIC8 334 aa19.16■□□□□ 0.66
SH3BP2-220ENST00000511663 CAPN11Q9UMQ6 739 aa19.16■□□□□ 0.66
SH3BP2-220ENST00000511663 TRBV23OR9-2A0A075B6M9 112 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 A0A0U1RQS6 177 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 INPP4BO15327 924 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 MFSD11O43934 449 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 KRT7P08729 469 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 CD48P09326 243 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 CCL4P13236 92 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 RPL26P61254 145 aaKnown RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 DSC2Q02487 901 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 SQSTM1Q13501 440 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 DPYSL3Q14195 570 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 PYCR3Q53H96 274 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 NKAIN2Q5VXU1 208 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 NCBP2-AS2Q69YL0 99 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 ZNF574Q6ZN55 896 aaPredicted RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 RFLNAQ6ZTI6 216 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 VASH2Q86V25 355 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 OR10G6Q8NH81 332 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 PTCD2Q8WV60 388 aaKnown RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 MAML1Q92585 1016 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 EXTL1Q92935 676 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 ZNF830Q96NB3 372 aaPredicted RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 TSGA13Q96PP4 275 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 ZNF670Q9BS34 389 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 RIOK2Q9BVS4 552 aaKnown RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 PCDH9Q9HC56 1237 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 RPL26L1Q9UNX3 145 aaKnown RBP19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 PLEKHM1Q9Y4G2 1056 aa19.15■□□□□ 0.66
SH3BP2-220ENST00000511663 SMG1Q96Q15 3661 aaKnown RBP19.14■□□□□ 0.66
SH3BP2-220ENST00000511663 IGHV1OR21-1A0A087WYE8 117 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 CLDN7O95471 211 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 STC1P52823 247 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 NFATC3Q12968 1075 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 SRSF6Q13247 344 aaKnown RBP19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 ATP13A4Q4VNC1 1196 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 TMEM71Q6P5X7 295 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 PRICKLE2Q7Z3G6 844 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 TRIM74Q86UV6 250 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 DTX1Q86Y01 620 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 IL22RA1Q8N6P7 574 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 LPCAT1Q8NF37 534 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 CTNNBL1Q8WYA6 563 aaPredicted RBP19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 FATE1Q969F0 183 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 TDRD1Q9BXT4 1180 aaKnown RBP19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 ASPSCR1Q9BZE9 553 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 CBX8Q9HC52 389 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 SLC39A1Q9NY26 324 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 PKD2L2Q9NZM6 624 aa19.14■□□□□ 0.65
SH3BP2-220ENST00000511663 ARHGEF17Q96PE2 2063 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 MAP3K6O95382 1288 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 SOD1P00441 154 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 H2AFZP0C0S5 128 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 FGF3P11487 239 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 SLC2A4P14672 509 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 MPSTP25325 297 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 ARSEP51690 589 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 LINC00303Q3SY05 128 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 ALG1LQ6GMV1 187 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 H2AFVQ71UI9 128 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 CHST15Q7LFX5 561 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 LUZP1Q86V48 1076 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 EXD3Q8N9H8 876 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 JPH3Q8WXH2 748 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 SH3KBP1Q96B97 665 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 AGAP2Q99490 1192 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 MLPHQ9BV36 600 aaPredicted RBP19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 ADGRE3Q9BY15 652 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 FAM83DQ9H4H8 585 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 RMI1Q9H9A7 625 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 VPS18Q9P253 973 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 UVRAGQ9P2Y5 699 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 PCDHGA4Q9Y5G9 962 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 PCDHGA3Q9Y5H0 932 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 ST14Q9Y5Y6 855 aa19.13■□□□□ 0.65
SH3BP2-220ENST00000511663 GCN1Q92616 2671 aaKnown RBP19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 C1orf232A0A0U1RR37 186 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 DUX1O43812 170 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 PROSCO94903 275 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 TPM3P06753 285 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 PBX1P40424 430 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 FASLGP48023 281 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 KCNC4Q03721 635 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 DCAF12Q5T6F0 453 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 FAM129CQ86XR2 697 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 CCDC13Q8IYE1 715 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 ART4Q93070 314 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 COX14Q96I36 57 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 SMIM14Q96QK8 99 aa19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 MAK16Q9BXY0 300 aaKnown RBP19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.12■□□□□ 0.65
SH3BP2-220ENST00000511663 SYCE3A1L190 88 aa19.11■□□□□ 0.65
SH3BP2-220ENST00000511663 RGSL1A5PLK6 1076 aa19.11■□□□□ 0.65
SH3BP2-220ENST00000511663 ANKRD66B4E2M5 251 aa19.11■□□□□ 0.65
SH3BP2-220ENST00000511663 ATP1A1P05023 1023 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms