RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DHX9Q08211 1270 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 KCTD19Q17RG1 926 aaPredicted RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 AARS2Q5JTZ9 985 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 LYPLAL1Q5VWZ2 237 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 ALS2CLQ60I27 953 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 AFTPHQ6ULP2 937 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 Q6ZSR6 202 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 OR13C4Q8NGS5 318 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 FBXO25Q8TCJ0 367 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 PYROXD1Q8WU10 500 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.97■□□□□ 0.79
USP53-203ENST00000507597 SCAMP4Q969E2 229 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 HIC2Q96JB3 615 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 DNAJC1Q96KC8 554 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 SIGLEC10Q96LC7 697 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 BMFQ96LC9 184 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 EBNA1BP2Q99848 306 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 ORAI3Q9BRQ5 295 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 ARRDC1-AS1Q9H2J1 176 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 IL26Q9NPH9 171 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 MBNL1Q9NR56 388 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 SLC6A14Q9UN76 642 aa19.97■□□□□ 0.79
USP53-203ENST00000507597 FNDC3AQ9Y2H6 1198 aaKnown RBP19.97■□□□□ 0.79
USP53-203ENST00000507597 NUMA1Q14980 2115 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 F8W8V4 182 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 KHNYNO15037 678 aaKnown RBP19.96■□□□□ 0.79
USP53-203ENST00000507597 RAD51BO15315 384 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 DFNA5O60443 496 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 SRP72O76094 671 aaKnown RBP19.96■□□□□ 0.79
USP53-203ENST00000507597 PRAMEF1O95521 474 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 RALBP11234 206 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 IGFALSP35858 605 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 PFN3P60673 137 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 ACVR1Q04771 509 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 PDIA2Q13087 525 aaKnown RBP19.96■□□□□ 0.79
USP53-203ENST00000507597 SPANXN3Q5MJ09 141 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 LDLRAP1Q5SW96 308 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 FNBP1LQ5T0N5 605 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 FAM151BQ6UXP7 276 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 GCNT7Q6ZNI0 430 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 SNX20Q7Z614 316 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 PHYKPLQ8IUZ5 450 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 PALM2Q8IXS6 379 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 SUMF1Q8NBK3 374 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 OR6P1Q8NGX9 317 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 C1orf216Q8TAB5 229 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 SGSM3Q96HU1 749 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 TTC25Q96NG3 672 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 VPS35Q96QK1 796 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 FMO2Q99518 471 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 ZCCHC2Q9C0B9 1178 aaKnown RBP19.96■□□□□ 0.79
USP53-203ENST00000507597 ASB8Q9H765 288 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 GDF3Q9NR23 364 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 FKBPLQ9UIM3 349 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 CRLS1Q9UJA2 301 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 RPS6KL1Q9Y6S9 549 aa19.96■□□□□ 0.79
USP53-203ENST00000507597 ESYT3A0FGR9 886 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 POM121BA6NF01 834 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 BHMG1C9JSJ3 638 aaPredicted RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 E7ESA3 106 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 SLC25A14O95258 325 aaPredicted RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 CFIP05156 583 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 MYCLP1P12525 358 aaPredicted RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 MC4RP32245 332 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 BLKP51451 505 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 CLDN2P57739 230 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 KIAA1024LP59773 190 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 CRADDP78560 199 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 CACNG1Q06432 222 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 FASTKD1Q53R41 847 aaKnown RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 ZRANB3Q5FWF4 1079 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 SLC23A3Q6PIS1 610 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 CERS6Q6ZMG9 384 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 SDCCAG8Q86SQ7 713 aaPredicted RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 TMEM135Q86UB9 458 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 LMNTD2Q8IXW0 634 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 OR4L1Q8NH43 312 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 GDAP1Q8TB36 358 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 CALML6Q8TD86 181 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 BTN2A2Q8WVV5 523 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 HDAC10Q969S8 669 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 TBATAQ96M53 351 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 HINFPQ9BQA5 517 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 TEX101Q9BY14 249 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 FAM86C1Q9NVL1 165 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 ZC3H7BQ9UGR2 993 aaKnown RBP19.95■□□□□ 0.78
USP53-203ENST00000507597 KCTD3Q9Y597 815 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 FANCMQ8IYD8 2048 aa19.95■□□□□ 0.78
USP53-203ENST00000507597 ABCA7Q8IZY2 2146 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 A0A1W2PR77 199 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 GPR89AB7ZAQ6 455 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 CFAP99D6REC4 459 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 GPR89BP0CG08 455 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 ELK3P41970 407 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 CSNK1EP49674 416 aaKnown RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 ATXN3P54252 364 aaPredicted RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 CDK3Q00526 305 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 NFATC2Q13469 925 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 THOC5Q13769 683 aaKnown RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 GTF2H3Q13889 308 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms