RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PNMA8BQ9ULN7 279 aaPredicted RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 SLC17A4Q9Y2C5 497 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 PKP3Q9Y446 797 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 SPO11Q9Y5K1 396 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 NCOR2Q9Y618 2525 aa16.6■□□□□ 0.25
SNCA-209ENST00000506244 TDRD6O60522 2096 aaKnown RBP16.6■□□□□ 0.25
SNCA-209ENST00000506244 ERI2A8K979 691 aaKnown RBP16.59■□□□□ 0.25
SNCA-209ENST00000506244 IFNB1P01574 187 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 IVLP07476 585 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 CXCR5P32302 372 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 ADRA1AP35348 466 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 FDFT1P37268 417 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 ACADVLP49748 655 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 PDE1BQ01064 536 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 PEX6Q13608 980 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 DEFB133Q30KQ1 61 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 C6orf132Q5T0Z8 1188 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 ALS2CLQ60I27 953 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 RANBP10Q6VN20 620 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 SLC35F6Q8N357 371 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 SPATA16Q9BXB7 569 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
SNCA-209ENST00000506244 VPS18Q9P253 973 aa16.59■□□□□ 0.25
SNCA-209ENST00000506244 C2orf81A6NN90 581 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 INPP4BO15327 924 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 DKK1O94907 266 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 AGTP01019 485 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 GIMD1P0DJR0 217 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 CKMT1AP12532 417 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 ACP1P24666 158 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 SPAM1P38567 509 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 SHC2P98077 582 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 ILF3Q12906 894 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNCA-209ENST00000506244 C1orf61Q13536 156 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 SNX1Q13596 522 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.24
SNCA-209ENST00000506244 DOK6Q6PKX4 331 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 C4orf22Q6V702 233 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 LINC00523Q86TU6 105 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 PHYKPLQ8IUZ5 450 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 TTC30BQ8N4P2 665 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 EID2BQ96D98 161 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 COX14Q96I36 57 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 APOLD1Q96LR9 279 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 WDR24Q96S15 920 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 AGAP2Q99490 1192 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 GSDMCQ9BYG8 508 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 MRPL40Q9NQ50 206 aaKnown RBP16.58■□□□□ 0.24
SNCA-209ENST00000506244 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.24
SNCA-209ENST00000506244 TOR4AQ9NXH8 423 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 PAK5Q9P286 719 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 SCN8AQ9UQD0 1980 aa16.58■□□□□ 0.24
SNCA-209ENST00000506244 ARID1BQ8NFD5 2236 aaPredicted RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 GPR89AB7ZAQ6 455 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 E7EVH7 732 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 PGRMC1O00264 195 aaKnown RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 METTL18O95568 372 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 ASMTLO95671 621 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 CRTAMO95727 393 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 AP2A1O95782 977 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 CEACAM5P06731 702 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 GPR89BP0CG08 455 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 BPIP17213 487 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 GNPDA1P46926 289 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 NR0B2Q15466 257 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 TAF1AQ15573 450 aaPredicted RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 CCDC157Q569K6 752 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 GSTA5Q7RTV2 222 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 RAB44Q7Z6P3 723 aaPredicted RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 TAF8Q7Z7C8 310 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 SLCO6A1Q86UG4 719 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 GALNT13Q8IUC8 556 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 RASGEF1CQ8N431 466 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 GPR26Q8NDV2 337 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 DTX3LQ8TDB6 740 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 OR2M4Q96R27 311 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 APOL2Q9BQE5 337 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 BOCQ9BWV1 1114 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 CLPBQ9H078 707 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 RMI1Q9H9A7 625 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 ARNT2Q9HBZ2 717 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 TTC7AQ9ULT0 858 aaPredicted RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 SUFUQ9UMX1 484 aa16.57■□□□□ 0.24
SNCA-209ENST00000506244 DRG1Q9Y295 367 aaKnown RBP16.57■□□□□ 0.24
SNCA-209ENST00000506244 FADS2P1A8MWK0 482 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 CES2O00748 559 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 AURKAO14965 403 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 YY2O15391 372 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 STX7O15400 261 aaKnown RBP16.56■□□□□ 0.24
SNCA-209ENST00000506244 GAS8O95995 478 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 ATP1A1P05023 1023 aaKnown RBP16.56■□□□□ 0.24
SNCA-209ENST00000506244 GP1BAP07359 652 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 LPOP22079 712 aaPredicted RBP16.56■□□□□ 0.24
SNCA-209ENST00000506244 LMAN1P49257 510 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 LRP8Q14114 963 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 KCTD11Q693B1 232 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 TRIM74Q86UV6 250 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
SNCA-209ENST00000506244 ARL10Q8N8L6 244 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms