RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FGF19O95750 216 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 GMPRP36959 345 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 NRIP1P48552 1158 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 PEX6Q13608 980 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 C2orf27AQ580R0 203 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 LY6G5CQ5SRR4 150 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 CATSPER1Q8NEC5 780 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 KATNBL1Q9H079 304 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 KANSL1LA0AUZ9 987 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SSC5DA1L4H1 1573 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 RGS14O43566 566 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 TCEA3O75764 348 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 MLYCDO95822 493 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 SERPINA6P08185 405 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ZCCHC18P0CG32 403 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ATP6V1B1P15313 513 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 HSPA7P48741 367 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 MPP2Q14168 576 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF621Q6ZSS3 439 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 PAQR9Q6ZVX9 377 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 YTHDF3Q7Z739 585 aaKnown RBP14.05□□□□□ -0.16
TCOF1-207ENST00000504761 LZICQ8WZA0 190 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 KLK6Q92876 244 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 TRIM4Q9C037 500 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 CAAP1Q9H8G2 361 aa14.05□□□□□ -0.16
TCOF1-207ENST00000504761 CHRNB3Q05901 458 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CACNG1Q06432 222 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 SERINC3Q13530 473 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PRKD1Q15139 912 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 LRRC23Q53EV4 343 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 KIAA0319Q5VV43 1072 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PAQR3Q6TCH7 311 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PIM3Q86V86 326 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 C11orf74Q86VG3 221 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 BBS7Q8IWZ6 715 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 KCTD14Q9BQ13 255 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 RWDD3Q9Y3V2 267 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PHIPQ8WWQ0 1821 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 LRATO95237 230 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CHI3L1P36222 383 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 ECT2LQ008S8 904 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 MBLAC2Q68D91 279 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 IZUMO2Q6UXV1 221 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 SYT12Q8IV01 421 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 RAVER1Q8IY67 606 aaKnown RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CNBD2Q96M20 576 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 TMEM248Q9NWD8 314 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 PADI4Q9UM07 663 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 TBC1D30Q9Y2I9 924 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 TRBV23OR9-2A0A075B6M9 112 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 SAC3D1A6NKF1 404 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 MAGEC1O60732 1142 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 FTH1P02794 183 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CYP11A1P05108 521 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 COL6A2P12110 1019 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 MAT2AP31153 395 aaKnown RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 DPYSQ14117 519 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 XKR6Q5GH73 641 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 FBXO46Q6PJ61 603 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 ADAM12O43184 909 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 GLDCP23378 1020 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CERS6Q6ZMG9 384 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF784Q8NCA9 323 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CLHC1Q8NHS4 586 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 CLPTM1LQ96KA5 538 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
TCOF1-207ENST00000504761 RGSL1A5PLK6 1076 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ANKRD66B4E2M5 251 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 SIX3O95343 332 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 CLDN7O95471 211 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 S100A3P33764 101 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 AP5B1Q2VPB7 878 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 LINC01465Q8N7H1 131 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 INPP5DQ92835 1189 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 RAD9AQ99638 391 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 NPAS2Q99743 824 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 CCDC134Q9H6E4 229 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 STX18Q9P2W9 335 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 PHF24Q9UPV7 400 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 SNX5Q9Y5X3 404 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 SNRPB2P08579 225 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 CNPP09543 421 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 DDX5P17844 614 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 PIK3R1P27986 724 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 PLEKHG4Q58EX7 1191 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 TBCELQ5QJ74 424 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms