RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 MAP3K7CLP57077 242 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 UFM1P61960 85 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 MRPS15P82914 257 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 GALNT2Q10471 571 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 OXA1LQ15070 435 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SMN1Q16637 294 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 TMTC4Q5T4D3 741 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ATAD3BQ5T9A4 648 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 XAF1Q6GPH4 301 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SPARTQ8N0X7 666 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 FAM83FQ8NEG4 500 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SLC22A17Q8WUG5 538 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SLC35F5Q8WV83 523 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 UBE2FQ969M7 185 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 BIRC7Q96CA5 298 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CDK15Q96Q40 435 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 FSD1LQ9BXM9 530 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 REXO4Q9GZR2 422 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 TRIT1Q9H3H1 467 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DDIT4Q9NX09 232 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 MID2Q9UJV3 735 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 FBXO5Q9UKT4 447 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 RBBP6Q7Z6E9 1792 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 NOTOA8MTQ0 251 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SLCO1B7G3V0H7 640 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 MITFO75030 526 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ABCB1P08183 1280 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ENO2P09104 434 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF37AP17032 561 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 PRDX3P30048 256 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 MTHFRP42898 656 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 HLCSP50747 726 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DGKQP52824 942 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DAB2P98082 770 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 TRIM32Q13049 653 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 RFTN1Q14699 578 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ATP6AP1Q15904 470 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SOWAHCQ53LP3 525 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CELF3Q5SZQ8 465 aaKnown RBP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.6□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF773Q6PK81 442 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 USP43Q70EL4 1123 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SLC26A9Q7LBE3 791 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 PELI3Q8N2H9 469 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 FAM167AQ96KS9 214 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CITED4Q96RK1 184 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 GPR20Q99678 358 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 TBC1D14Q9P2M4 693 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 SEPT3Q9UH03 358 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 CDH7Q9ULB5 785 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 KCTD3Q9Y597 815 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 DNAJC15Q9Y5T4 150 aa7.6□□□□□ -1.19
NEDD9-208ENST00000504387 LOC100506127A0A0U1RQW1 187 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GOLGA8CPA6NN73 597 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 C19orf81C9J6K1 198 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ENPP3O14638 875 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SSX4O60224 188 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RASAL1O95294 804 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PRSS56P0CW18 603 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FMO4P31512 558 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 RFC2P35250 354 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PIK3CGP48736 1102 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CYP4F2P78329 520 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CYP4F3Q08477 520 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SELPLGQ14242 412 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF846Q147U1 533 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CTU2Q2VPK5 515 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FKBP1CQ5VVH2 108 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GLYATQ6IB77 296 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 UGT3A1Q6NUS8 523 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CYHR1Q6ZMK1 362 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PIWIL4Q7Z3Z4 852 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 MICU2Q8IYU8 434 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 AFAP1L2Q8N4X5 818 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PTGR2Q8N8N7 351 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 REPS2Q8NFH8 660 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF420Q8TAQ5 688 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 NCLNQ969V3 563 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 CEP295NLQ96MC4 621 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 NECTIN4Q96NY8 510 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ZNF347Q96SE7 839 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 GAD1Q99259 594 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ERVK-18Q9QC07 812 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 LIMD1Q9UGP4 676 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ADAM28Q9UKQ2 775 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FZD10Q9ULW2 581 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 PIN4Q9Y237 131 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FAM50BQ9Y247 325 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 UGT2A1Q9Y4X1 527 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 SIPA1L1O43166 1804 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 EVPLQ92817 2033 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 UBR3Q6ZT12 1888 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 FAM47E-STBD1D6RA91 191 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TFECO14948 347 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 USP17L7P0C7H9 530 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 YBX3P16989 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 ADCYAP1R1P41586 468 aa7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TRAP1Q12931 704 aaKnown RBP7.59□□□□□ -1.19
NEDD9-208ENST00000504387 TP53BP2Q13625 1128 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms