RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TMEM184BQ9Y519 407 aaPredicted RBP14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MRPS18BQ9Y676 258 aaKnown RBP14.61□□□□□ -0.07
TRAF4-212ENST00000498540 ZNF106Q9H2Y7 1883 aaKnown RBP14.61□□□□□ -0.07
TRAF4-212ENST00000498540 MTSS1O43312 755 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 PGLSO95336 258 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 DLGAP3O95886 979 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 NFKBIAP25963 317 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 MIPP30301 263 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 HSPA9P38646 679 aaKnown RBP14.6□□□□□ -0.07
TRAF4-212ENST00000498540 HHEXQ03014 270 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 NFATC2Q13469 925 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 LRRC66Q68CR7 880 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 C16orf46Q6P387 395 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 USP45Q70EL2 814 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 KDELC2Q7Z4H8 507 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 GALNT13Q8IUC8 556 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 ENOX1Q8TC92 643 aaKnown RBP14.6□□□□□ -0.07
TRAF4-212ENST00000498540 NCSTNQ92542 709 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 AP2M1Q96CW1 435 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 RNF31Q96EP0 1072 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 PCMTD1Q96MG8 357 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-212ENST00000498540 AGAP2Q99490 1192 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 EFHD1Q9BUP0 239 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 FBXO8Q9NRD0 319 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 ETNK2Q9NVF9 386 aa14.6□□□□□ -0.07
TRAF4-212ENST00000498540 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
TRAF4-212ENST00000498540 TMCO5BA8MYB1 307 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 K7EM74 188 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 INPP4BO15327 924 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PRPSAP2O60256 369 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 TPM2P07951 284 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PDHA1P08559 390 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 TCN2P20062 427 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 F8A1P23610 371 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 STAT5AP42229 794 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 MAPK9P45984 424 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 HCAR3P49019 387 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 COPB1P53618 953 aaKnown RBP14.59□□□□□ -0.07
TRAF4-212ENST00000498540 LRP8Q14114 963 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 CT47A1Q5JQC4 288 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-212ENST00000498540 ARMC12Q5T9G4 340 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PLEKHA7Q6IQ23 1121 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 LZTR1Q8N653 840 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PIH1D2Q8WWB5 315 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 COX14Q96I36 57 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 ZPBPQ9BS86 351 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 NUP62CLQ9H1M0 184 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 SARS2Q9NP81 518 aaKnown RBP14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PARVAQ9NVD7 372 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 TBC1D29Q9UFV1 150 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 KLHL3Q9UH77 587 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PPIL1Q9Y3C6 166 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 PRKAB1Q9Y478 270 aa14.59□□□□□ -0.07
TRAF4-212ENST00000498540 ICE1Q9Y2F5 2266 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 TMEM191CA6NGB0 347 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 MAFKO60675 156 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 MAN1A1P33908 653 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 CD97P48960 835 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 MLLT10P55197 1068 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 MC1RQ01726 317 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 PTSQ03393 145 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 KLRB1Q12918 225 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 SEPT6Q14141 434 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 CRTC2Q53ET0 693 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-212ENST00000498540 HIST2H2BCQ6DN03 193 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 SYT11Q9BT88 431 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 TRIT1Q9H3H1 467 aaKnown RBP14.58□□□□□ -0.08
TRAF4-212ENST00000498540 FANCLQ9NW38 375 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 SIDT1Q9NXL6 827 aaKnown RBP14.58□□□□□ -0.08
TRAF4-212ENST00000498540 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 KCNMB2Q9Y691 235 aa14.58□□□□□ -0.08
TRAF4-212ENST00000498540 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
TRAF4-212ENST00000498540 A6NCN8 305 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 LGALS16A8MUM7 142 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 POLR1CO15160 346 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 DNAJC6O75061 913 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 LRCH4O75427 683 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 RNF8O76064 485 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 ATP1A1P05023 1023 aaKnown RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 AMPD1P23109 780 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 MMP13P45452 471 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 ZNF135P52742 658 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 C4orf17Q53FE4 359 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 IYDQ6PHW0 289 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 ZNF765Q7L2R6 523 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 CHST15Q7LFX5 561 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 ATPAF2Q8N5M1 289 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 RIOK2Q9BVS4 552 aaKnown RBP14.57□□□□□ -0.08
TRAF4-212ENST00000498540 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 ZWILCHQ9H900 591 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 KCNK6Q9Y257 313 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 KCTD3Q9Y597 815 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 RPS6KL1Q9Y6S9 549 aa14.57□□□□□ -0.08
TRAF4-212ENST00000498540 UNC79Q9P2D8 2635 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 H3BRJ5 948 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 FZD6O60353 706 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 ASMTLO95671 621 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 KRT7P08729 469 aa14.56□□□□□ -0.08
TRAF4-212ENST00000498540 FURINP09958 794 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms