RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GALNT3Q14435 633 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SPA17Q15506 151 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 QPCTQ16769 361 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 FAM182AQ5T1J6 154 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 KAZNQ674X7 775 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC30A9Q6PML9 568 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 BZW1Q7L1Q6 419 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SPRED1Q7Z699 444 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 B3GNT8Q7Z7M8 397 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TRIM74Q86UV6 250 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 NT5DC3Q86UY8 548 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SPACA3Q8IXA5 215 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 CCDC170Q8IYT3 715 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 ARL14Q8N4G2 192 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 Q8N9G6 341 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 IMP4Q96G21 291 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 SCARF2Q96GP6 870 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 LIN37Q96GY3 246 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 PRR11Q96HE9 360 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 COX14Q96I36 57 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TMEM74Q96NL1 305 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 AGAP3Q96P47 875 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 OR2M4Q96R27 311 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 AGAP2Q99490 1192 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 RIOK2Q9BVS4 552 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 FOXP3Q9BZS1 431 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 STRADBQ9C0K7 418 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 EPB41L5Q9HCM4 733 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 LUC7LQ9NQ29 371 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TAAR2Q9P1P5 351 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 TMEM98Q9Y2Y6 226 aa8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 ANKRD11Q6UB99 2663 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-207ENST00000498212 FAM208BQ5VWN6 2430 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 A0A0A6YYK5 440 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PMS2P1A4D2B8 440 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 RHPN2P1A8MT19 583 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 CDRT15L2A8MXV6 281 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ZW10O43264 779 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 CST8O60676 142 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TNFSF15O95150 251 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ASMTLO95671 621 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ECEL1O95672 775 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ATP1A1P05023 1023 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 CCKBRP32239 447 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ACTR1BP42025 376 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 MLLT3P42568 568 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 NR2C2P49116 596 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ACTR1AP61163 376 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TLE3Q04726 772 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 EIF3IQ13347 325 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 BIRC2Q13490 618 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PRKD1Q15139 912 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC14A2Q15849 920 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PCSK7Q16549 785 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TAZQ16635 292 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PYCR3Q53H96 274 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TEX44Q53QW1 395 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TFDP3Q5H9I0 405 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 HENMT1Q5T8I9 393 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 BROXQ5VW32 411 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 SPOCD1Q6ZMY3 1216 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 B4GALNT4Q76KP1 1039 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 MARK2Q7KZI7 788 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 RAB11FIP2Q7L804 512 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 KDELC2Q7Z4H8 507 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 C17orf82Q86X59 251 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 GALNT13Q8IUC8 556 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 NAGSQ8N159 534 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TFB1MQ8WVM0 346 aaKnown RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 KCNE4Q8WWG9 221 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 P3H4Q92791 437 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TRIB3Q96RU7 358 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 WDR24Q96S15 920 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC25A51Q9H1U9 297 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 GOLPH3Q9H4A6 298 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 FAM83DQ9H4H8 585 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PRORYQ9H606 182 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 VPS18Q9P253 973 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 SAE1Q9UBE0 346 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 TFR2Q9UP52 801 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 PCDHA13Q9Y5I0 950 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 ST14Q9Y5Y6 855 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 CELSR3Q9NYQ7 3312 aa8.42□□□□□ -1.06
HMGXB4-207ENST00000498212 hCG_1818297A0A087WSY0 165 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 RGSL1A5PLK6 1076 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 FADS2P1A8MWK0 482 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 PLD2O14939 933 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 KLK10O43240 276 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 MTSS1O43312 755 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 DNAJC6O75061 913 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 ZRANB2O95218 330 aaKnown RBP eCLIP8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 MT-CYBP00156 380 aaPredicted RBP8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC4A1P02730 911 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 ITGA2BP08514 1039 aa8.41□□□□□ -1.06
HMGXB4-207ENST00000498212 PIRTP0C851 137 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms