RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RAET1GQ6H3X3 334 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 DRICH1Q6PGQ1 229 aaPredicted RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 TMC3Q7Z5M5 1100 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 BTN2A2Q8WVV5 523 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 MAIP1Q8WWC4 291 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 C1orf54Q8WWF1 131 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 SCAMP4Q969E2 229 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 EID2BQ96D98 161 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PDXPQ96GD0 296 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 LRRC61Q9BV99 259 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 FICDQ9BVA6 458 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 LGR4Q9BXB1 951 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 TRABDQ9H4I3 376 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 FGF22Q9HCT0 170 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PHPT1Q9NRX4 125 aaPredicted RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PKD2L2Q9NZM6 624 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 HACD3Q9P035 362 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 KLQ9UEF7 1012 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 APOBEC3BQ9UH17 382 aaKnown RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 MYLKQ15746 1914 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GOLGA6CA6NDK9 693 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GOLGA6BA6NDN3 693 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 PDE2AO00408 941 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-208ENST00000497892 TNFRSF10CO14798 259 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 AURKAO14965 403 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 RASGRP1O95267 797 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 METTL18O95568 372 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 AGTP01019 485 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SLC4A1P02730 911 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GOLGA6DP0CG33 693 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GIMD1P0DJR0 217 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 HMGCLP35914 325 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GPR1P46091 355 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 BLKP51451 505 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 HK3P52790 923 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SIM1P81133 766 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-208ENST00000497892 CDK3Q00526 305 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SNX1Q13596 522 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 CCNG2Q16589 344 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 LONRF2Q1L5Z9 754 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 HENMT1Q5T8I9 393 aaKnown RBP11.19□□□□□ -0.62
ERCC8-208ENST00000497892 KCTD16Q68DU8 428 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 KCTD11Q693B1 232 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 ENPP7Q6UWV6 458 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 RANBP10Q6VN20 620 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 PARP9Q8IXQ6 854 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 RASGEF1CQ8N431 466 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SLC25A41Q8N5S1 370 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 EID2Q8N6I1 236 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 OR56A4Q8NGH8 313 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 OR4C6Q8NH72 309 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 PBKQ96KB5 322 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 WDR24Q96S15 920 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 AGAP2Q99490 1192 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 RIOK2Q9BVS4 552 aaKnown RBP11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GPR63Q9BZJ6 419 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SLC13A1Q9BZW2 595 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 CDH19Q9H159 772 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 TCEAL2Q9H3H9 227 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-208ENST00000497892 GOLGA6AQ9NYA3 693 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 SPASTQ9UBP0 616 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 FTSJ1Q9UET6 329 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 ZNF148Q9UQR1 794 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 CSNK1G3Q9Y6M4 447 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 DGKBQ9Y6T7 804 aa11.19□□□□□ -0.62
ERCC8-208ENST00000497892 MED19A0JLT2 244 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 NEMP2A6NFY4 417 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 TRIM38O00635 465 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 SCAMP1O15126 338 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 FFAR2O15552 330 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 SIAH2O43255 324 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 AQP9O43315 295 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 TNFSF14O43557 240 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 ADRB1P08588 477 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 SRP54P61011 504 aaKnown RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 OLIG2Q13516 323 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 PRRT3Q5FWE3 981 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 N4BP2L1Q5TBK1 243 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 FAXCQ5TGI0 409 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 GLT6D1Q7Z4J2 308 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 HID1Q8IV36 788 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 FSTL5Q8N475 847 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 TTC30BQ8N4P2 665 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 PRELID2Q8N945 189 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 GPR26Q8NDV2 337 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 BLOC1S5Q8TDH9 187 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 OR1E3Q8WZA6 343 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 TSACCQ96A04 125 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 LRRC45Q96CN5 670 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 PLEKHG4BQ96PX9 1271 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 OSBPL9Q96SU4 736 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 APOL2Q9BQE5 337 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 FAM83DQ9H4H8 585 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms