RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FGGP02679 453 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 CTSEP14091 401 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 ADRA1AP35348 466 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 HMGCLP35914 325 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 ALG11Q2TAA5 492 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 FAM182AQ5T1J6 154 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 HENMT1Q5T8I9 393 aaKnown RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 PDPK2PQ6A1A2 396 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 LVRNQ6Q4G3 990 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 RANBP10Q6VN20 620 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 HID1Q8IV36 788 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 FAM181AQ8N9Y4 354 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 LMX1AQ8TE12 382 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 ATG4AQ8WYN0 398 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 CNDP2Q96KP4 475 aaKnown RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 NAP1L3Q99457 506 aaPredicted RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 GORASP1Q9BQQ3 440 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 FICDQ9BVA6 458 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 RIOK2Q9BVS4 552 aaKnown RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 FRMD8Q9BZ67 464 aaPredicted RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 UCKL1Q9NWZ5 548 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 CD84Q9UIB8 345 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 SHOC2Q9UQ13 582 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 ZNF148Q9UQR1 794 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 DRG1Q9Y295 367 aaKnown RBP11.41□□□□□ -0.58
HLA-B-254ENST00000497377 PCDHGA1Q9Y5H4 931 aa11.41□□□□□ -0.58
HLA-B-254ENST00000497377 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 PRSS38A1L453 326 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 TMEM202A6NGA9 273 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ERI2A8K979 691 aaKnown RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 F5H423 210 aaPredicted RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 CES2O00748 559 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SOD1P00441 154 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 IVLP07476 585 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ANXA6P08133 673 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 PIRTP0C851 137 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 CKMT2P17540 419 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 CXCR5P32302 372 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 FDFT1P37268 417 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 CHRNA4P43681 627 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 PDE1BQ01064 536 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ILKQ13418 452 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SIX1Q15475 284 aaPredicted RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ZCCHC8Q6NZY4 707 aaKnown RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 C4orf22Q6V702 233 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 RFLNAQ6ZTI6 216 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 RBFAQ8N0V3 343 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 PELI3Q8N2H9 469 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 RASGEF1CQ8N431 466 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SLC25A41Q8N5S1 370 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 DTX3LQ8TDB6 740 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 C1orf54Q8WWF1 131 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SCG3Q8WXD2 468 aaKnown RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 OR1E3Q8WZA6 343 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 GLMNQ92990 594 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SCAMP4Q969E2 229 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 TSACCQ96A04 125 aaPredicted RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 EID2BQ96D98 161 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 HIC2Q96JB3 615 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 PLEKHG4BQ96PX9 1271 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 WDR24Q96S15 920 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 C19orf43Q9BQ61 176 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 TBL1YQ9BQ87 522 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ZSCAN5AQ9BUG6 496 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 LRRC61Q9BV99 259 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 LGR4Q9BXB1 951 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 LRRC40Q9H9A6 602 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 ARNT2Q9HBZ2 717 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 FGF22Q9HCT0 170 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 TTC7AQ9ULT0 858 aaPredicted RBP11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SLC17A4Q9Y2C5 497 aa11.4□□□□□ -0.58
HLA-B-254ENST00000497377 SCN8AQ9UQD0 1980 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 TRIM38O00635 465 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 FFAR2O15552 330 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SIGLEC6O43699 453 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 DKK1O94907 266 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 AGTP01019 485 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 CEACAM5P06731 702 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 FTH1P19P0C7X4 201 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 GIMD1P0DJR0 217 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 ACP1P24666 158 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PMLP29590 882 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 DUSP3P51452 185 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-254ENST00000497377 GDF10P55107 478 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SHC2P98077 582 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PEX6Q13608 980 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 KCTD11Q693B1 232 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 RD3Q7Z3Z2 195 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 GLT6D1Q7Z4J2 308 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 LINC00523Q86TU6 105 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 GKN2Q86XP6 184 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SLC35F6Q8N357 371 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 TTC30BQ8N4P2 665 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 TRAM1L1Q8N609 369 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 CCDC89Q8N998 374 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 BLOC1S5Q8TDH9 187 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms