RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ARSDP51689 593 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 XIAPP98170 497 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 KIAA0930Q6ICG6 404 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-222ENST00000496567 RELL1Q8IUW5 271 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 PALM2Q8IXS6 379 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 TMEM145Q8NBT3 493 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 OR6P1Q8NGX9 317 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 WDR83Q9BRX9 315 aaKnown RBP21.65■■□□□ 1.06
C9orf3-222ENST00000496567 MIR1-1HGQ9H1L0 117 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 RAB23Q9ULC3 237 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 FAM169AQ9Y6X4 670 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 PLXNA2O75051 1894 aa21.64■■□□□ 1.06
C9orf3-222ENST00000496567 CCL22O00626 93 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 TOR1BO14657 336 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 SRP72O76094 671 aaKnown RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 PRAMEF1O95521 474 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 MAOBP27338 520 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 MC4RP32245 332 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 IGFALSP35858 605 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 VSNL1P62760 191 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 RACK1P63244 317 aaKnown RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 PEX6Q13608 980 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 INPP5AQ14642 412 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 NAA30Q147X3 362 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 CRYMQ14894 314 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 SLMAPQ14BN4 828 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 AFTPHQ6ULP2 937 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 CFAP36Q96G28 342 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 SGSM3Q96HU1 749 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 FCRL3Q96P31 734 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 TRIM56Q9BRZ2 755 aaKnown RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 SUDS3Q9H7L9 328 aaPredicted RBP21.64■■□□□ 1.05
C9orf3-222ENST00000496567 AASDHPPTQ9NRN7 309 aa21.64■■□□□ 1.05
C9orf3-222ENST00000496567 ZNF106Q9H2Y7 1883 aaKnown RBP21.63■■□□□ 1.05
C9orf3-222ENST00000496567 SPAG17Q6Q759 2223 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 UQCRHLA0A096LP55 91 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 ZCWPW2A0A1B0GU75 182 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 CCDC162PA2VCL2 907 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 CTIFO43310 598 aaKnown RBP21.63■■□□□ 1.05
C9orf3-222ENST00000496567 VAPBO95292 243 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 UQCRHP07919 91 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 ITGALP20701 1170 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 ITPKAP23677 461 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 TRIM23P36406 574 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 CHRNA6Q15825 494 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 STEAP4Q687X5 459 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 PLA2G15Q8NCC3 412 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 OR4L1Q8NH43 312 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 ZNF398Q8TD17 642 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 LOXL4Q96JB6 756 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 PARD6BQ9BYG5 372 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 ASB8Q9H765 288 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 SUSD2Q9UGT4 822 aa21.63■■□□□ 1.05
C9orf3-222ENST00000496567 A6NNZ2 444 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 K7ESM1 405 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 GAPDHSO14556 408 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-222ENST00000496567 GOT2P00505 430 aaKnown RBP21.62■■□□□ 1.05
C9orf3-222ENST00000496567 MYBL2P10244 700 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 GNSP15586 552 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 CLDN2P57739 230 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 CACNG1Q06432 222 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 NFATC2Q13469 925 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 LONRF1Q17RB8 773 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 GPR33Q49SQ1 333 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 ADAMTSL4Q6UY14 1074 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 KYAT3Q6YP21 454 aaKnown RBP21.62■■□□□ 1.05
C9orf3-222ENST00000496567 UNC5AQ6ZN44 842 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 GCNT7Q6ZNI0 430 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 SNX20Q7Z614 316 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 ABI3BPQ7Z7G0 1075 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 BMFQ96LC9 184 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 C9orf72Q96LT7 481 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 SLC6A18Q96N87 628 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 AGAP2Q99490 1192 aa21.62■■□□□ 1.05
C9orf3-222ENST00000496567 POM121BA6NF01 834 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 PRR5-ARHGAP8B1AHC4 643 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 BCAT2O15382 392 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 SOD1P00441 154 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 GSTA2P09210 222 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 CD38P28907 300 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 YPEL5P62699 121 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 ATP13A5Q4VNC0 1218 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 ZRANB3Q5FWF4 1079 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 GSPT2Q8IYD1 628 aaKnown RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 PELI3Q8N2H9 469 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 C1orf216Q8TAB5 229 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 GSDMBQ8TAX9 411 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 ATOH1Q92858 354 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.61■■□□□ 1.05
C9orf3-222ENST00000496567 ULK4Q96C45 1275 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 TTC25Q96NG3 672 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 VPS35Q96QK1 796 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 WDR26Q9H7D7 661 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 TM9SF3Q9HD45 589 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 RAB21Q9UL25 225 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 CA5BQ9Y2D0 317 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 FADS2P1A8MWK0 482 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 SPAG6O75602 509 aa21.61■■□□□ 1.05
C9orf3-222ENST00000496567 HOXD12P35452 270 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms