RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TUBB3Q13509 450 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 PNCKQ6P2M8 343 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 STXBP4Q6ZWJ1 553 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 MRGPREQ86SM8 312 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 DRC7Q8IY82 874 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 ZNF683Q8IZ20 524 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 GUF1Q8N442 669 aaKnown RBP8.78□□□□□ -1
GARNL3-219ENST00000495172 BCORP1Q8N888 145 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 OR2AP1Q8NGE2 309 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 PWWP2AQ96N64 755 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 ZNF559Q9BR84 538 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 BACH2Q9BYV9 841 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 IMPG2Q9BZV3 1241 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 SLC39A2Q9NP94 309 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 TRNAU1APQ9NX07 287 aaKnown RBP8.78□□□□□ -1
GARNL3-219ENST00000495172 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
GARNL3-219ENST00000495172 TBC1D29Q9UFV1 150 aa8.78□□□□□ -1
GARNL3-219ENST00000495172 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
GARNL3-219ENST00000495172 CHD3Q12873 2000 aaKnown RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 GRAP2O75791 330 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 POP4O95707 220 aaKnown RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 ESRRAP11474 423 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 MYCLP1P12525 358 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 KELP23276 732 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 OR1E1P30953 314 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 MMP12P39900 470 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 PRKD1Q15139 912 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
GARNL3-219ENST00000495172 PTCHD3Q3KNS1 767 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 ZFYVE27Q5T4F4 411 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 CACHD1Q5VU97 1274 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 RETSATQ6NUM9 610 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 FAM198BQ6UWH4 519 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 PLXDC1Q8IUK5 500 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 PDILTQ8N807 584 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 NR4A3Q92570 626 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 RSC1A1Q92681 617 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 ST7Q9NRC1 585 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 TMEM63CQ9P1W3 806 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 LRFN1Q9P244 771 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 ZNF212Q9UDV6 495 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 SLC12A6Q9UHW9 1150 aa8.77□□□□□ -1.01
GARNL3-219ENST00000495172 SEC16AO15027 2179 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 IGHV5-51A0A0C4DH38 117 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 NKX2-6A6NCS4 301 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GOLGA6CA6NDK9 693 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GOLGA6BA6NDN3 693 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 IKBKBO14920 756 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 LDB2O43679 373 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 SNX2O60749 519 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 LCA5LO95447 670 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GOLGA6DP0CG33 693 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 IGFBP2P18065 325 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 TFE3P19532 575 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-219ENST00000495172 STAT6P42226 847 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 SMSP52788 366 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 DGKQP52824 942 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 RUNX1T1Q06455 604 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 AGERQ15109 404 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GPR19Q15760 415 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 UGP2Q16851 508 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 C5orf22Q49AR2 442 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 PLEKHS1Q5SXH7 462 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 IZUMO3Q5VZ72 239 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 LCLAT1Q6UWP7 414 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 SLC9A9Q8IVB4 645 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 C12orf56Q8IXR9 622 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 DEFB106AQ8N104 65 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 VWA5B2Q8N398 1253 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 DNAAF3Q8N9W5 541 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 PPP4R1Q8TF05 950 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 ARHGEF2Q92974 986 aaKnown RBP8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GBP5Q96PP8 586 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 NDC1Q9BTX1 674 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 DMAC2Q9NW81 257 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 GOLGA6AQ9NYA3 693 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 RARRES3Q9UL19 164 aa8.76□□□□□ -1.01
GARNL3-219ENST00000495172 RNF225M0QZC1 329 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SRGAP2O75044 1071 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SCRG1O75711 98 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 ZWINTO95229 277 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 GSRP00390 522 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 F10P00742 488 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 HOXC4P09017 264 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 TNFAIP3P21580 790 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 CCR1P32246 355 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 NEK4P51957 841 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SNRPD1P62314 119 aaKnown RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 LSM11P83369 360 aaKnown RBP eCLIP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 PDE1BQ01064 536 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 GNA12Q03113 381 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SNTB1Q13884 538 aaKnown RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 PTPRRQ15256 657 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 LONRF1Q17RB8 773 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 OTUD1Q5VV17 481 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 DENND2CQ68D51 928 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 MTFR2Q6P444 385 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 LIPIQ6XZB0 460 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 CHSY3Q70JA7 882 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 CLEC1AQ8NC01 280 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms