RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 XIRP2A4UGR9 3374 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 CCDC154A6NI56 674 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 C2orf81A6NN90 581 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 ZNF195O14628 629 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 EI24O14681 340 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 TNFAIP8O95379 198 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 ALDH2P05091 517 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 MBL2P11226 248 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 MYL4P12829 197 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 AQP1P29972 269 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 OR4D1Q15615 310 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 AAGABQ6PD74 315 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 SETD3Q86TU7 594 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 IFNLR1Q8IU57 520 aaPredicted RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 GALNT15Q8N3T1 639 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 TTC30BQ8N4P2 665 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 SDCCAG3Q96C92 435 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 FCRL5Q96RD9 977 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 RTP3Q9BQQ7 232 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 KIFC1Q9BW19 673 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 PAIP1Q9H074 479 aaKnown RBP13.41□□□□□ -0.26
GPC1-209ENST00000495100 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 WWOXQ9NZC7 414 aa13.41□□□□□ -0.26
GPC1-209ENST00000495100 K7ERQ8 282 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 NTRK1P04629 796 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 ABCB1P08183 1280 aaPredicted RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 PRKACGP22612 351 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 AKT1P31749 480 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 RGRP47804 291 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 INPP5AQ14642 412 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 SLC2A7Q6PXP3 512 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 OR52B6Q8NGF0 335 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 EEF1AKMT1Q8WVE0 214 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TRIB2Q92519 343 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 GTF2IRD1Q9UHL9 959 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 ANKRD6Q9Y2G4 727 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 POLR3HQ9Y535 204 aaPredicted RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 DGKBQ9Y6T7 804 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 UBFD1O14562 309 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 PSMD3O43242 534 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 DIRAS1O95057 198 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 MADCAM1Q13477 382 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 MAPRE1Q15691 268 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 ZNF423Q2M1K9 1284 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 MYLK3Q32MK0 819 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 GALNT5Q7Z7M9 940 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 KBTBD6Q86V97 674 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 MON1AQ86VX9 555 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 GPSM1Q86YR5 675 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 CILP2Q8IUL8 1156 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 KCTD13Q8WZ19 329 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 NTAN1Q96AB6 310 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 ITCHQ96J02 903 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 KATNBL1Q9H079 304 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 POLR1BQ9H9Y6 1135 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 UBA2Q9UBT2 640 aaPredicted RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 CRLS1Q9UJA2 301 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 RPL26L1Q9UNX3 145 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 MAGP20916 626 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 RPL5P46777 297 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 PSMD7P51665 324 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 CLCQ05315 142 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 C16orf87Q6PH81 154 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TSSK3Q96PN8 268 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 SLC25A51Q9H1U9 297 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TLR8Q9NR97 1041 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 CNOT6Q9ULM6 557 aaKnown RBP13.4□□□□□ -0.26
GPC1-209ENST00000495100 DNAJC15Q9Y5T4 150 aa13.4□□□□□ -0.26
GPC1-209ENST00000495100 TOR1BO14657 336 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 GABRDO14764 452 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 VPS26AO75436 327 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 FASP25445 335 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 MAP4P27816 1152 aaKnown RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 LPIN1Q14693 890 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SAMD4BQ5PRF9 694 aaKnown RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 RASAL3Q86YV0 1011 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SLC44A2Q8IWA5 706 aaPredicted RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 CLYBLQ8N0X4 340 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SMG9Q9H0W8 520 aaKnown RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 INTS7Q9NVH2 962 aaKnown RBP13.39□□□□□ -0.27
GPC1-209ENST00000495100 SLCO1B7G3V0H7 640 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 H3BNX3 289 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 SEC22BO75396 215 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 FKBP9O95302 570 aa13.39□□□□□ -0.27
GPC1-209ENST00000495100 LBPP18428 481 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms