RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ARSEP51690 589 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 GPLD1P80108 840 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 DPYSL3Q14195 570 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 IFI16Q16666 785 aaKnown RBP23.1■■□□□ 1.29
COL27A1-208ENST00000494780 NKAIN2Q5VXU1 208 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 NCBP2-AS2Q69YL0 99 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 GALNT13Q8IUC8 556 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 AGBL5Q8NDL9 886 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 CCDC112Q8NEF3 446 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 EXD1Q8NHP7 514 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 COX14Q96I36 57 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 TSGA13Q96PP4 275 aa23.1■■□□□ 1.29
COL27A1-208ENST00000494780 TDRD1Q9BXT4 1180 aaKnown RBP23.1■■□□□ 1.29
COL27A1-208ENST00000494780 RBM22Q9NW64 420 aaKnown RBP eCLIP23.1■■□□□ 1.292e-8■■■■■ 44.3
COL27A1-208ENST00000494780 A0A087X0T9 212 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 FAM228BP0C875 321 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 THRAP10827 490 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 SFTPCP11686 197 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 CCNCP24863 283 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 CSTF2P33240 577 aaKnown RBP eCLIP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 PBX1P40424 430 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 FASLGP48023 281 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 ATP1A2P50993 1020 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 RPL26P61254 145 aaKnown RBP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 DSC2Q02487 901 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 NFATC3Q12968 1075 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 IHHQ14623 411 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 MARK2Q7KZI7 788 aaKnown RBP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 TRIM74Q86UV6 250 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 IQCDQ96DY2 449 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 AGAP2Q99490 1192 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 RIOK2Q9BVS4 552 aaKnown RBP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 FAM117AQ9C073 453 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 RPL26L1Q9UNX3 145 aaKnown RBP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 CHKBQ9Y259 395 aa23.09■■□□□ 1.29
COL27A1-208ENST00000494780 HEMK1Q9Y5R4 338 aaPredicted RBP23.09■■□□□ 1.29
COL27A1-208ENST00000494780 WT1P19544 449 aaPredicted RBP23.08■■□□□ 1.29
COL27A1-208ENST00000494780 CSF2RBP32927 897 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 ZBED6P86452 979 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 NFKBIBQ15653 356 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 TBR1Q16650 682 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 ANKRD20A8PQ5CZ79 823 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 CAVIN1Q6NZI2 390 aaKnown RBP23.08■■□□□ 1.29
COL27A1-208ENST00000494780 TMEM71Q6P5X7 295 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 ALKBH5Q6P6C2 394 aaKnown RBP23.08■■□□□ 1.29
COL27A1-208ENST00000494780 LYSMD1Q96S90 227 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 ZNF670Q9BS34 389 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 FUCA2Q9BTY2 467 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 DDA1Q9BW61 102 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 STARD5Q9NSY2 213 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 VPS18Q9P253 973 aa23.08■■□□□ 1.29
COL27A1-208ENST00000494780 INPP4BO15327 924 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 ASMTLO95671 621 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 PRLP01236 227 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 ARSDP51689 593 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 TPM4P67936 248 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 FANCCQ00597 558 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 PDK2Q15119 407 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 ATP13A4Q4VNC1 1196 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 PRICKLE2Q7Z3G6 844 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 SFRP1Q8N474 314 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL27A1-208ENST00000494780 KCTD6Q8NC69 237 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 ARRDC2Q8TBH0 407 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 SLC37A2Q8TED4 501 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 NKD1Q969G9 470 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 SLC38A3Q99624 504 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 CLMPQ9H6B4 373 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 CAPN11Q9UMQ6 739 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 TTLL3Q9Y4R7 772 aa23.07■■□□□ 1.28
COL27A1-208ENST00000494780 SDK2Q58EX2 2172 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 B4E171 279 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 DNAJC6O75061 913 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 MAP3K6O95382 1288 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 WISP1O95388 367 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 CLDN7O95471 211 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 ITGB6P18564 788 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 MPSTP25325 297 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 TSPAN7P41732 249 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.06■■□□□ 1.28
COL27A1-208ENST00000494780 MAP7D3Q8IWC1 876 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 LPCAT1Q8NF37 534 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 OR10G6Q8NH81 332 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 ZNF564Q8TBZ8 553 aaPredicted RBP23.06■■□□□ 1.28
COL27A1-208ENST00000494780 HTR3CQ8WXA8 447 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 JPH3Q8WXH2 748 aaPredicted RBP23.06■■□□□ 1.28
COL27A1-208ENST00000494780 ART4Q93070 314 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 PMEPA1Q969W9 287 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 AHCYL2Q96HN2 611 aaKnown RBP23.06■■□□□ 1.28
COL27A1-208ENST00000494780 ASPSCR1Q9BZE9 553 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 PCDH9Q9HC56 1237 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 TMEM9Q9P0T7 183 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 PDP2Q9P2J9 529 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 ZNHIT2Q9UHR6 403 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 B3GALT1Q9Y5Z6 326 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 MYO18BQ8IUG5 2567 aa23.06■■□□□ 1.28
COL27A1-208ENST00000494780 HLA-DQB2P05538 268 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 FAM87AP0C7U9 286 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 MX2P20592 715 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 GJC1P36383 396 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms