RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 NME1P15531 152 aaKnown RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 TPSB2P20231 275 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 ADCY8P40145 1251 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 SRP54P61011 504 aaKnown RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 DR1Q01658 176 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 MSLNQ13421 630 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 SHBQ15464 509 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 PDPK2PQ6A1A2 396 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 SYDE1Q6ZW31 735 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 HID1Q8IV36 788 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 PHACTR4Q8IZ21 702 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 LGR4Q9BXB1 951 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 CASS4Q9NQ75 786 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
TRA2A-209ENST00000494255 NEU2Q9Y3R4 380 aa12.4□□□□□ -0.42
TRA2A-209ENST00000494255 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
TRA2A-209ENST00000494255 KNL1Q8NG31 2342 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 GLYATL1P3A0A0U1RQE8 302 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 SDC3O75056 442 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 PIAS2O75928 621 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 ASMTLO95671 621 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 TNFP01375 233 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 CD59P13987 128 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 HADHAP40939 763 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 GRIA1P42261 906 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 BNIP3Q12983 259 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 ITGA9Q13797 1035 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 PTK6Q13882 451 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 KCTD19Q17RG1 926 aaPredicted RBP12.39□□□□□ -0.43
TRA2A-209ENST00000494255 ALG11Q2TAA5 492 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 CERCAMQ5T4B2 595 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 DOK6Q6PKX4 331 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 RD3Q7Z3Z2 195 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 SAP25Q8TEE9 199 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 TSACCQ96A04 125 aaPredicted RBP12.39□□□□□ -0.43
TRA2A-209ENST00000494255 C19orf43Q9BQ61 176 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 IL26Q9NPH9 171 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 BFARQ9NZS9 450 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 SPASTQ9UBP0 616 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 CDC23Q9UJX2 597 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 KCTD3Q9Y597 815 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 MYLKQ15746 1914 aa12.39□□□□□ -0.43
TRA2A-209ENST00000494255 PRSS38A1L453 326 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 HEATR9A2RTY3 570 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TMEM202A6NGA9 273 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 LDB2O43679 373 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SLC25A14O95258 325 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CTSEP14091 401 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 DGKAP23743 735 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 GRK6P43250 576 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 MAGEA6P43360 314 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 NPY2RP49146 381 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF140P52738 457 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 HK3P52790 923 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 DHX34Q14147 1143 aaKnown RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 KCNJ11Q14654 390 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 FAM151BQ6UXP7 276 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PHYKPLQ8IUZ5 450 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SPATA4Q8NEY3 305 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 STYXQ8WUJ0 223 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 OR1E3Q8WZA6 343 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 COX14Q96I36 57 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TBATAQ96M53 351 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 KRT12Q99456 494 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 FRMD8Q9BZ67 464 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 FGF22Q9HCT0 170 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 FRYLO94915 3013 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 ASCC3Q8N3C0 2202 aaKnown RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SH3BP5O60239 455 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CEACAM5P06731 702 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 ADRA1DP25100 572 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PTGIRP43119 386 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SESN2P58004 480 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PTPRCAPQ14761 206 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CHRNA6Q15825 494 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PRRT3Q5FWE3 981 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 LRRC8BQ6P9F7 803 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 NLRP9Q7RTR0 991 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 JAMLQ86YT9 394 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms