RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 AMACRQ9UHK6 382 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 TMEM98Q9Y2Y6 226 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 PCDHGA4Q9Y5G9 962 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
MRPL55-231ENST00000492170 ST14Q9Y5Y6 855 aa15.26■□□□□ 0.03
MRPL55-231ENST00000492170 A0A087X0T9 212 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 A0A0U1RQS6 177 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 STMND1H3BQB6 276 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 MATN3O15232 486 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 FAM228BP0C875 321 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 HNRNPH3P31942 346 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 STC1P52823 247 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 LIMK2P53671 638 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 DSC2Q02487 901 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 PTSQ03393 145 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 LRP8Q14114 963 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 IFI16Q16666 785 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 PYCR3Q53H96 274 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 ALKBH5Q6P6C2 394 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 ZNF574Q6ZN55 896 aaPredicted RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 MARK2Q7KZI7 788 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 DTX1Q86Y01 620 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 NRSN1Q8IZ57 195 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 KCTD6Q8NC69 237 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 OR4D9Q8NGE8 314 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 SCAMP4Q969E2 229 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 FATE1Q969F0 183 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 TDRD1Q9BXT4 1180 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 RBM22Q9NW64 420 aaKnown RBP eCLIP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 KCNK4Q9NYG8 393 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 CHKBQ9Y259 395 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 LUC7L2Q9Y383 392 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 PLEKHM1Q9Y4G2 1056 aa15.25■□□□□ 0.03
MRPL55-231ENST00000492170 SETXQ7Z333 2677 aaKnown RBP15.25■□□□□ 0.03
MRPL55-231ENST00000492170 TENM4Q6N022 2769 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 IGHV1OR21-1A0A087WYE8 117 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 PPM1DO15297 605 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 SLC28A2O43868 658 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 MAP3K6O95382 1288 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 ASMTLO95671 621 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 CCL4P13236 92 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 MX2P20592 715 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 CCNCP24863 283 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 CASP14P31944 242 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 CSTF2P33240 577 aaKnown RBP eCLIP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 FASLGP48023 281 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 PPM1FP49593 454 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 ATP1A2P50993 1020 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 ARSEP51690 589 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 RPL26P61254 145 aaKnown RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 GPLD1P80108 840 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 PDK2Q15119 407 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 ANKRD20A8PQ5CZ79 823 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 NKAIN2Q5VXU1 208 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 MAP7D3Q8IWC1 876 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 RAVER1Q8IY67 606 aaKnown RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 AGBL5Q8NDL9 886 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 EXD1Q8NHP7 514 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 CPLX3Q8WVH0 158 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 EXTL1Q92935 676 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 AHCYL2Q96HN2 611 aaKnown RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 COX14Q96I36 57 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 TSGA13Q96PP4 275 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 SMIM14Q96QK8 99 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 TAAR9Q96RI9 348 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 RIOK2Q9BVS4 552 aaKnown RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 RPL26L1Q9UNX3 145 aaKnown RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 HEMK1Q9Y5R4 338 aaPredicted RBP15.24■□□□□ 0.03
MRPL55-231ENST00000492170 BOD1L1Q8NFC6 3051 aa15.24■□□□□ 0.03
MRPL55-231ENST00000492170 INPP4BO15327 924 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 THRAP10827 490 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 FGF3P11487 239 aaPredicted RBP15.23■□□□□ 0.03
MRPL55-231ENST00000492170 CSF2RBP32927 897 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 NFATC3Q12968 1075 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 SQSTM1Q13501 440 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 LINC00303Q3SY05 128 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 PRICKLE2Q7Z3G6 844 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 EXD3Q8N9H8 876 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 LPCAT1Q8NF37 534 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 OR10G6Q8NH81 332 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 SLC37A2Q8TED4 501 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 AGAP2Q99490 1192 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 DNAJC7Q99615 494 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 SLC38A3Q99624 504 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 FAM117AQ9C073 453 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
MRPL55-231ENST00000492170 PCDH9Q9HC56 1237 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 VPS18Q9P253 973 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 LCMT1Q9UIC8 334 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 PCDHGA3Q9Y5H0 932 aa15.23■□□□□ 0.03
MRPL55-231ENST00000492170 C1orf232A0A0U1RR37 186 aa15.22■□□□□ 0.03
MRPL55-231ENST00000492170 DUX1O43812 170 aa15.22■□□□□ 0.03
MRPL55-231ENST00000492170 PROSCO94903 275 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms