RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PCYT1BQ9Y5K3 369 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-208ENST00000490653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.32□□□□□ -1.24
PRPF4B-208ENST00000490653 LRP4O75096 1905 aa7.32□□□□□ -1.24
PRPF4B-208ENST00000490653 UNC13CQ8NB66 2214 aa7.32□□□□□ -1.24
PRPF4B-208ENST00000490653 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CFAP69A5D8W1 941 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NPIPB15A6NHN6 443 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 C3orf70A6NLC5 250 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 LMO7DNF2Z398 122 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TPP1O14773 563 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 FZD6O60353 706 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 HEXIM1O94992 359 aaKnown RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 RASGRP1O95267 797 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 PGLSO95336 258 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CPP00450 1065 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 JCHAINP01591 159 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 HLA-DQB2P05538 268 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ELFN1P0C7U0 828 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CDK4P11802 303 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TNNT1P13805 278 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CTSEP14091 401 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 AK4P27144 223 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 VIPR1P32241 457 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TRIM23P36406 574 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 GARSP41250 739 aaKnown RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 DUSP3P51452 185 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 RENBPP51606 427 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 SUOXP51687 545 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ZNF135P52742 658 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 AP1S1P61966 158 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CCDC173Q0VFZ6 552 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 GALNT2Q10471 571 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TBX2Q13207 712 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 MTM1Q13496 603 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ZNF235Q14590 738 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 GRM3Q14832 879 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NR0B2Q15466 257 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 HADHQ16836 314 aaKnown RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ISXQ2M1V0 245 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 HS1BP3Q53T59 392 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TECPR1Q7Z6L1 1165 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ZSCAN30Q86W11 494 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NRROSQ86YC3 692 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ATPAF2Q8N5M1 289 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 PAF1Q8N7H5 531 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CNTD1Q8N815 330 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 Q8N9G6 341 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 KYQ8NBH2 561 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 BTN2A2Q8WVV5 523 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 MAML1Q92585 1016 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 SCAMP4Q969E2 229 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 FAF2Q96CS3 445 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ATXN7L3BQ96GX2 97 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 WDR92Q96MX6 357 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 WDR24Q96S15 920 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CCDC3Q9BQI4 270 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 DUSP23Q9BVJ7 150 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CEP41Q9BYV8 373 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ABCG4Q9H172 646 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ABCG8Q9H221 673 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TSPY26PQ9H489 355 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 GOLPH3Q9H4A6 298 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NHEJ1Q9H9Q4 299 aaPredicted RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 CYP4F12Q9HCS2 524 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 SPATS2LQ9NUQ6 558 aaKnown RBP7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 DONSONQ9NYP3 566 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 KLQ9UEF7 1012 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 PHTF1Q9UMS5 762 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ZNF232Q9UNY5 417 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 GPR34Q9UPC5 381 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 TMEM98Q9Y2Y6 226 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 PPIL1Q9Y3C6 166 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 ENTPD2Q9Y5L3 495 aa7.31□□□□□ -1.24
PRPF4B-208ENST00000490653 NAV2Q8IVL1 2488 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 TRBV23OR9-2A0A075B6M9 112 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 A0A1W2PQM1 296 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 SSU72P8A0A1W2PR75 194 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 SERTM1A2A2V5 107 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 MATN3O15232 486 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 B4GAT1O43505 415 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 AKR1B10O60218 316 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 NOBOXO60393 691 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 CLDN7O95471 211 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 SOD1P00441 154 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 CEACAM5P06731 702 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 MMP2P08253 660 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 TMEM253P0C7T8 217 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 ABCG1P45844 678 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 NOP2P46087 812 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 PDX1P52945 283 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 POLR2LP62875 67 aaKnown RBP7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 GABREP78334 506 aa7.3□□□□□ -1.24
PRPF4B-208ENST00000490653 TLE3Q04726 772 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms