RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SEZ6Q53EL9 994 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 C6orf141Q5SZD1 244 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM182AQ5T1J6 154 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GARNL3Q5VVW2 1013 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 STYK1Q6J9G0 422 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 LRRC8EQ6NSJ5 796 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM45BPQ6NSW5 357 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CREB3L2Q70SY1 520 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SPATC1Q76KD6 591 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 STRADAQ7RTN6 431 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RAB44Q7Z6P3 723 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ERO1BQ86YB8 467 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 HID1Q8IV36 788 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CMTR2Q8IYT2 770 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SAMD14Q8IZD0 417 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PCDH20Q8N6Y1 951 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 XXYLT1Q8NBI6 393 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MCUQ8NE86 351 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MCFD2Q8NI22 146 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NDNFQ8TB73 568 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM45AQ8TCE6 357 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZFAND1Q8TCF1 268 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF384Q8TF68 577 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 DEPDC1BQ8WUY9 529 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SEMA4DQ92854 862 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 HDAC10Q969S8 669 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 DACT3Q96B18 629 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NSUN4Q96CB9 384 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 FAF2Q96CS3 445 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MCRS1Q96EZ8 462 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SHDQ96IW2 340 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MARK4Q96L34 752 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MYRFLQ96LU7 910 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZFP42Q96MM3 310 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MUS81Q96NY9 551 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RPRD1AQ96P16 312 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 OPALINQ96PE5 141 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SECISBP2Q96T21 854 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 EBNA1BP2Q99848 306 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 BTBD2Q9BX70 525 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SLIRPQ9GZT3 109 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 C2orf40Q9H1Z8 148 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RNPEPQ9H4A4 650 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 BCAS3Q9H6U6 928 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM206Q9H813 350 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ERVMER34-1Q9H9K5 563 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PLAC1Q9HBJ0 212 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZFP14Q9HCL3 533 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF277Q9NRM2 450 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KLHL11Q9NVR0 708 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 INTS10Q9NVR2 710 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GLTPQ9NZD2 209 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ACTR3BQ9P1U1 418 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TRMT112Q9UI30 125 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TEKT2Q9UIF3 430 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TRMT6Q9UJA5 497 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 OSGIN1Q9UJX0 560 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ANAPC2Q9UJX6 822 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 STOML2Q9UJZ1 356 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CPSF3Q9UKF6 684 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 OAZ3Q9UMX2 235 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AP4E1Q9UPM8 1137 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CDYLQ9Y232 598 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PDE10AQ9Y233 779 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NAALAD2Q9Y3Q0 740 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PCM1Q15154 2024 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TOGARAM1Q9Y4F4 1720 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TANC1Q9C0D5 1861 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 CICQ96RK0 1608 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ALS2Q96Q42 1657 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 TYW5A2RUC4 315 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 LINC00862A6NCI5 91 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 KRT87PA6NCN2 255 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 FIGNL2A6NMB9 653 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF487B1APH4 448 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 H0Y858 1186 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 H3BM21 787 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 EI24O14681 340 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 YKT6O15498 198 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GRID2O43424 1007 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 B4GAT1O43505 415 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 EXTL3O43909 919 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 DFNA5O60443 496 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ACSL4O60488 711 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GREM1O60565 184 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 SOAT2O75908 522 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ZBTB7AO95365 584 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 MAP3K6O95382 1288 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 SNAP29O95721 258 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ALDOAP04075 364 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 HMGN1P05114 100 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 GPIP06744 558 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 UMPSP11172 480 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 ACADMP11310 421 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 PSKH1P11801 424 aa4.75□□□□□ -1.65
SNRNP40-206ENST00000489853 COL6A1P12109 1028 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms