RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 KDELC2Q7Z4H8 507 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 TSPAN33Q86UF1 283 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 TP53INP2Q8IXH6 220 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 PGBD5Q8N414 524 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 AVL9Q8NBF6 648 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 ZPBPQ9BS86 351 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 SYT11Q9BT88 431 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 RTN4Q9NQC3 1192 aaKnown RBP19.34■□□□□ 0.69
APTX-229ENST00000489583 IP6K2Q9UHH9 426 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 B3GALT1Q9Y5Z6 326 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 MYO18BQ8IUG5 2567 aa19.34■□□□□ 0.69
APTX-229ENST00000489583 TRBV23OR9-2A0A075B6M9 112 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 FUCA1P04066 466 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 THRAP10827 490 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 PRKCIP41743 596 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 HHEXQ03014 270 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 CEACAM20Q6UY09 585 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 CYP4V2Q6ZWL3 525 aaPredicted RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 TECPR1Q7Z6L1 1165 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 SLC9B2Q86UD5 537 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 CBARPQ8N350 705 aaPredicted RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.68
APTX-229ENST00000489583 CCHCR1Q8TD31 782 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 ABCG8Q9H221 673 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 GPN2Q9H9Y4 310 aaPredicted RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 ETNK2Q9NVF9 386 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 RCOR3Q9P2K3 495 aaPredicted RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 PPIL1Q9Y3C6 166 aa19.33■□□□□ 0.68
APTX-229ENST00000489583 BZW2Q9Y6E2 419 aaKnown RBP19.33■□□□□ 0.68
APTX-229ENST00000489583 A8MU76 341 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 INPP4BO15327 924 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 RAD1O60671 282 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 RARAP10276 462 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 ITGB6P18564 788 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 MAP4P27816 1152 aaKnown RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 IL1R2P27930 398 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 FASLGP48023 281 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 MC1RQ01726 317 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 KCNAB2Q13303 367 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 NCAPHQ15003 741 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 PYCR3Q53H96 274 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 CHST15Q7LFX5 561 aaPredicted RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 APTXQ7Z2E3 356 aaKnown RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 NLRP8Q86W28 1048 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 NLGN4XQ8N0W4 816 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 NLGN4YQ8NFZ3 816 aaPredicted RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 NCSTNQ92542 709 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 SCARF2Q96GP6 870 aaPredicted RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 NSMCE3Q96MG7 304 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 TRIT1Q9H3H1 467 aaKnown RBP19.32■□□□□ 0.68
APTX-229ENST00000489583 CBX8Q9HC52 389 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 TUBD1Q9UJT1 453 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 ANAPC7Q9UJX3 599 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 SCN8AQ9UQD0 1980 aa19.32■□□□□ 0.68
APTX-229ENST00000489583 A0A0J9YYE9 177 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 MYO1FO00160 1098 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 DDX3XO00571 662 aaKnown RBP eCLIP19.31■□□□□ 0.68
APTX-229ENST00000489583 TERTO14746 1132 aaKnown RBP19.31■□□□□ 0.68
APTX-229ENST00000489583 MAP3K6O95382 1288 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 PEX11BO96011 259 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 SERPINC1P01008 464 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 TRBC1P01850 177 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 LIFP15018 202 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 MAPK9P45984 424 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 POLE2P56282 527 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 SEPT6Q14141 434 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 ZFYVE27Q5T4F4 411 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 WDR74Q6RFH5 385 aaPredicted RBP19.31■□□□□ 0.68
APTX-229ENST00000489583 TRIM74Q86UV6 250 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 MAP7D3Q8IWC1 876 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 RAVER1Q8IY67 606 aaKnown RBP19.31■□□□□ 0.68
APTX-229ENST00000489583 SLC37A2Q8TED4 501 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 PIH1D2Q8WWB5 315 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 HTR3CQ8WXA8 447 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 SCAMP4Q969E2 229 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 HERPUD2Q9BSE4 406 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 RIOK2Q9BVS4 552 aaKnown RBP19.31■□□□□ 0.68
APTX-229ENST00000489583 SLC12A9Q9BXP2 914 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 ISCUQ9H1K1 167 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 EPB41L1Q9H4G0 881 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 PCDH18Q9HCL0 1135 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 PKD2L2Q9NZM6 624 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 VPS18Q9P253 973 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 AMACRQ9UHK6 382 aa19.31■□□□□ 0.68
APTX-229ENST00000489583 PDHA1P08559 390 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 SKILP12757 684 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 RPL26P61254 145 aaKnown RBP19.3■□□□□ 0.68
APTX-229ENST00000489583 PTSQ03393 145 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 NFATC2Q13469 925 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 CLCA4Q14CN2 919 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 IQCB1Q15051 598 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 IFI16Q16666 785 aaKnown RBP19.3■□□□□ 0.68
APTX-229ENST00000489583 ANKS6Q68DC2 871 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 PHYKPLQ8IUZ5 450 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 SFRP1Q8N474 314 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 KCTD6Q8NC69 237 aa19.3■□□□□ 0.68
APTX-229ENST00000489583 ZNF564Q8TBZ8 553 aaPredicted RBP19.3■□□□□ 0.68
APTX-229ENST00000489583 ZNF830Q96NB3 372 aaPredicted RBP19.3■□□□□ 0.68
APTX-229ENST00000489583 RMI1Q9H9A7 625 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms