RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MLXIPLQ9NP71 852 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 RAD18Q9NS91 495 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 ITM2BQ9Y287 266 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 CRYL1Q9Y2S2 319 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 VCANP13611 3396 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 CKAP5Q14008 2032 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 A0A096LPK6 155 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 SPINT1O43278 529 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 STMN1P16949 149 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 CRHR1P34998 444 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 CCT5P48643 541 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 CSRP3P50461 194 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 SLC12A2P55011 1212 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 SATB1Q01826 763 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 NFATC2Q13469 925 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 LRRC14Q15048 493 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 ZKSCAN8Q15776 578 aaPredicted RBP21.55■■□□□ 1.04
SMC4-221ENST00000489573 CHRNA6Q15825 494 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 CST6Q15828 149 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 SEPT7Q16181 437 aaKnown RBP21.55■■□□□ 1.04
SMC4-221ENST00000489573 FBXO43Q4G163 708 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 TAF1BQ53T94 588 aaPredicted RBP21.55■■□□□ 1.04
SMC4-221ENST00000489573 PPM1JQ5JR12 505 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 HECTD2Q5U5R9 776 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 FAM45BPQ6NSW5 357 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 HSD11B1LQ7Z5J1 315 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 OR2T3Q8NH03 318 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 FAM45AQ8TCE6 357 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
SMC4-221ENST00000489573 FBRSQ9HAH7 460 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 DUSP12Q9UNI6 340 aa21.55■■□□□ 1.04
SMC4-221ENST00000489573 UBA6A0AVT1 1052 aaPredicted RBP21.54■■□□□ 1.04
SMC4-221ENST00000489573 SHISA7A6NL88 538 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 PLK4O00444 970 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 AREL1O15033 823 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 GPR39O43194 453 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 GLRA3O75311 464 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 ADH1BP00325 375 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 C2P06681 752 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 ELFN1P0C7U0 828 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 HOXB2P14652 356 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 CRABP2P29373 138 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 DCDC1P59894 354 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 RAB10P61026 200 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 GPR33Q49SQ1 333 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 ZNF776Q68DI1 518 aaPredicted RBP21.54■■□□□ 1.04
SMC4-221ENST00000489573 LIPIQ6XZB0 460 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 RFLNAQ6ZTI6 216 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 CDHR3Q6ZTQ4 885 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 RAPH1Q70E73 1250 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 TXNDC5Q8NBS9 432 aaKnown RBP21.54■■□□□ 1.04
SMC4-221ENST00000489573 RAB7BQ96AH8 199 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 TSPAN17Q96FV3 270 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 SLC17A7Q9P2U7 560 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 TLK1Q9UKI8 766 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 XIRP2A4UGR9 3374 aa21.54■■□□□ 1.04
SMC4-221ENST00000489573 TRBV5-4A0A0C4DH59 114 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 RGSL1A5PLK6 1076 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 H0Y858 1186 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 PSMD11O00231 422 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 PHGDHO43175 533 aaKnown RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 SHOX2O60902 331 aaPredicted RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 ADAM23O75077 832 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 C5AR1P21730 350 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 PPARGP37231 505 aaPredicted RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 P2RY2P41231 377 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 WDR4P57081 412 aaKnown RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 TAS2R39P59534 338 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 CNTN1Q12860 1018 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 LYPLAL1Q5VWZ2 237 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 KIAA1211LQ6NV74 962 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 ZNF549Q6P9A3 640 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 ZNF398Q8TD17 642 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 DYDC1Q8WWB3 177 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 TTC1Q99614 292 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 OLFM1Q99784 485 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 AARSD1Q9BTE6 412 aaKnown RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 NFKBIL1Q9UBC1 381 aaPredicted RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 DCDC2Q9UHG0 476 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 CRLS1Q9UJA2 301 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 ANKRD6Q9Y2G4 727 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 VWA7Q9Y334 891 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 MID1O15344 667 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 PTGER3P43115 390 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 COPAP53621 1224 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 MLF2Q15773 248 aaPredicted RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 DBN1Q16643 649 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 INSCQ1MX18 579 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 HHATQ5VTY9 493 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 LVRNQ6Q4G3 990 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 SERPINA9Q86WD7 417 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 CEP97Q8IW35 865 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 ADHFE1Q8IWW8 467 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 RAVER1Q8IY67 606 aaKnown RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 MAFAQ8NHW3 353 aaPredicted RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 FAM111AQ96PZ2 611 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 WRAP53Q9BUR4 548 aaKnown RBP21.53■■□□□ 1.04
SMC4-221ENST00000489573 CDH19Q9H159 772 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 CCDC68Q9H2F9 335 aa21.53■■□□□ 1.04
SMC4-221ENST00000489573 C12orf65Q9H3J6 166 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms