RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 UBA2Q9UBT2 640 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ARHGAP26Q9UNA1 814 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 RUVBL2Q9Y230 463 aaKnown RBP8.46□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 C15orf41Q9Y2V0 281 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 VWA7Q9Y334 891 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 C5orf42Q9H799 3197 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
VTI1A-207ENST00000489357 MYLKQ15746 1914 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ANAPC1Q9H1A4 1944 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 C2orf81A6NN90 581 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 PRR5-ARHGAP8B1AHC4 643 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 H7C0S8 307 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 INSIG1O15503 277 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 COCHO43405 550 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 MBTPS2O43462 519 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 DIAPH2O60879 1101 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 FKBP6O75344 327 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 STC2O76061 302 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 IPO13O94829 963 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ANP32DO95626 131 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 OLFM2O95897 454 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TBX18O95935 607 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 GLUD1P00367 558 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ENO1P06733 434 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SBK3P0C264 359 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TPBGLP0DKB5 382 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 KITP10721 976 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TFEBP19484 476 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 CHRNA4P43681 627 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 EPHB3P54753 998 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ALDH18A1P54886 795 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ADARP55265 1226 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ARHGAP8P85298 464 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 MPP1Q00013 466 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 IRF9Q00978 393 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 BTKQ06187 659 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SMAD4Q13485 552 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 DLG2Q15700 870 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SMAD2Q15796 467 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TAF12Q16514 161 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TECRLQ5HYJ1 363 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 AARS2Q5JTZ9 985 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 HECTD2Q5U5R9 776 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 AFTPHQ6ULP2 937 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 GPR149Q86SP6 731 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ADGRG6Q86SQ4 1221 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TTC7BQ86TV6 843 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SLC41A1Q8IVJ1 513 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 CEP97Q8IW35 865 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SCUBE1Q8IWY4 988 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 FAM217AQ8IXS0 508 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 PGBD5Q8N414 524 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 GPATCH11Q8N954 259 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 HJURPQ8NCD3 748 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 KREMEN2Q8NCW0 462 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 RBM15BQ8NDT2 890 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 RP9Q8TA86 221 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ACTRT2Q8TDY3 377 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 KCTD4Q8WVF5 259 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF707Q96C28 371 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 L3HYPDHQ96EM0 354 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 MAELQ96JY0 434 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 SCYL1Q96KG9 808 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 UHRF1Q96T88 793 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 EBF4Q9BQW3 602 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 RTKNQ9BST9 563 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 DENND2DQ9H6A0 471 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 BATF3Q9NR55 127 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 NLE1Q9NVX2 485 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ARMCX1Q9P291 453 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 STX18Q9P2W9 335 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 XPR1Q9UBH6 696 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 MARCOQ9UEW3 520 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 CD207Q9UJ71 328 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 VPS28Q9UK41 221 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 PRPF19Q9UMS4 504 aaKnown RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 PLA2G4CQ9UP65 541 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 FAM50BQ9Y247 325 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 YIPF1Q9Y548 306 aa8.45□□□□□ -1.06
VTI1A-207ENST00000489357 ZFP37Q9Y6Q3 630 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-207ENST00000489357 RGSL1A5PLK6 1076 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 CD3EAPO15446 510 aaKnown RBP8.44□□□□□ -1.06
VTI1A-207ENST00000489357 PHGDHO43175 533 aaKnown RBP8.44□□□□□ -1.06
VTI1A-207ENST00000489357 DLX3O60479 287 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 CCNT2O60583 730 aaKnown RBP8.44□□□□□ -1.06
VTI1A-207ENST00000489357 LYPLA1O75608 230 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-207ENST00000489357 SEC24AO95486 1093 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 RHOCP08134 193 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 IL9P15248 144 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 GNAZP19086 355 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 IMPDH1P20839 514 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 FDXRP22570 491 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 CORO1AP31146 461 aaKnown RBP8.44□□□□□ -1.06
VTI1A-207ENST00000489357 SLC6A4P31645 630 aa8.44□□□□□ -1.06
VTI1A-207ENST00000489357 ARRB2P32121 409 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms