RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 C3orf20Q8ND61 904 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 HDAC10Q969S8 669 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 LRRC3BQ96PB8 259 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 LRRC37BQ96QE4 947 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SYT11Q9BT88 431 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 ECT2Q9H8V3 914 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SEC61A2Q9H9S3 476 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 MRPL47Q9HD33 250 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 HEBP1Q9NRV9 189 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 DDIT4Q9NX09 232 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 TUBD1Q9UJT1 453 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 SCINQ9Y6U3 715 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 PIAS3Q9Y6X2 628 aa8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 HELZP42694 1942 aaKnown RBP8.25□□□□□ -1.09
TRAPPC12-221ENST00000489032 WDFY3Q8IZQ1 3526 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SYNJ2BP-COX16A0A087WUM0 186 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 TYW5A2RUC4 315 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GOLGA6CA6NDK9 693 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GOLGA6BA6NDN3 693 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SIGLEC16A6NMB1 481 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 M0QYT0 321 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 IRAK2O43187 625 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 MSI1O43347 362 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 TSPAN6O43657 245 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 CDC14BO60729 498 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 TMEM127O75204 238 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ENDOD1O94919 500 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 IPO7O95373 1038 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 FYNP06241 537 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GOLGA6DP0CG33 693 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ARSAP15289 507 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GYPEP15421 78 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 PDGFRAP16234 1089 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ABCB4P21439 1286 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GPD1P21695 349 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 RRM1P23921 792 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SDC4P31431 198 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCR1P32246 355 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 CYLC1P35663 651 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZXDBP98169 803 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SATB1Q01826 763 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GAD2Q05329 585 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 DEUP1Q05D60 604 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 PTP4A2Q12974 167 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 NME3Q13232 169 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC18A3Q16572 532 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 SLC25A52Q3SY17 297 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 RALGPS2Q86X27 583 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 DENND1CQ8IV53 801 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 CCDC117Q8IWD4 279 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 BBS7Q8IWZ6 715 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 MYO1HQ8N1T3 1032 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 OR5M3Q8NGP4 307 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 TTC8Q8TAM2 541 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZNF480Q8WV37 535 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 AZIN2Q96A70 460 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ZNF653Q96CK0 615 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 NEIL1Q96FI4 390 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 PIWIL1Q96J94 861 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 LOXL4Q96JB6 756 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 LINC00597Q9H2U6 94 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 NHEJ1Q9H9Q4 299 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 LMAN1LQ9HAT1 526 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 HPS4Q9NQG7 708 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GOLGA6AQ9NYA3 693 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 GTSE1Q9NYZ3 720 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 COX16Q9P0S2 106 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 CNOT8Q9UFF9 292 aaKnown RBP8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 ITPR1Q14643 2758 aa8.24□□□□□ -1.09
TRAPPC12-221ENST00000489032 AKAP13Q12802 2813 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 LAMA1P25391 3075 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 A0A087X0T9 212 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 A0A1W2PRX2 142 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 SPECC1L-ADORA2AF8WAN1 911 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 KIF2AO00139 706 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 MTSS1O43312 755 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 TOP3BO95985 862 aaKnown RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 MOCS2O96007 188 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 IGLV3-27P01718 113 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 TUBB4AP04350 444 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 PLEKP08567 350 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 H2AFZP0C0S5 128 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 FAM228BP0C875 321 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 CR2P20023 1033 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 RDXP35241 583 aaKnown RBP8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 HGFACQ04756 655 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 SPA17Q15506 151 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 ARL13BQ3SXY8 428 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 BRMS1LQ5PSV4 323 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 C10orf76Q5T2E6 689 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 DAB2IPQ5VWQ8 1189 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 WDR59Q6PJI9 974 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 C19orf48Q6RUI8 117 aa8.23□□□□□ -1.09
TRAPPC12-221ENST00000489032 LCNL1Q6ZST4 164 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms