RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SPTY2D1-AS1A0A0U1RR47 76 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 TCRBV7S3A2A0A539 114 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 INPP4BO15327 924 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 ASMTLO95671 621 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 HOXC4P09017 264 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 TEAD1P28347 426 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 MAGEA6P43360 314 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 BNC1Q01954 994 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 SUZ12Q15022 739 aaKnown RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 CCDC38Q502W7 563 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 HENMT1Q5T8I9 393 aaKnown RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 ANKRD22Q5VYY1 191 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 CASC4Q6P4E1 433 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 ADAMTSL4Q6UY14 1074 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 KDM7AQ6ZMT4 941 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 MACC1Q6ZN28 852 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 NLRP9Q7RTR0 991 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 RD3Q7Z3Z2 195 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 PARGQ86W56 976 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 SPATS2Q86XZ4 545 aaKnown RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 SLC22A18ASQ8N1D0 253 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 TRAM1L1Q8N609 369 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 CEP112Q8N8E3 955 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 BBOF1Q8ND07 529 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 MCUQ8NE86 351 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 GDAP1Q8TB36 358 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 STYXQ8WUJ0 223 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 FUBP1Q96AE4 644 aaKnown RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 HIC2Q96JB3 615 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 WDR92Q96MX6 357 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 AGAP2Q99490 1192 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 ELF4Q99607 663 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 IL22Q9GZX6 179 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 XAB2Q9HCS7 855 aaKnown RBP15.65■□□□□ 0.1
C9orf3-219ENST00000488186 SAMD15Q9P1V8 674 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 KLQ9UEF7 1012 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 KCTD3Q9Y597 815 aa15.65■□□□□ 0.1
C9orf3-219ENST00000488186 CCDC78A2IDD5 438 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 C4orf47A7E2U8 309 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ESPNB1AK53 854 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 H3BM21 787 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SMAPO00193 183 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SLC30A4O14863 429 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 YKT6O15498 198 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 RAD51CO43502 376 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 LDB2O43679 373 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SLC25A14O95258 325 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-219ENST00000488186 TNFP01375 233 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 MYCLP1P12525 358 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-219ENST00000488186 CCT8P50990 548 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 BLKP51451 505 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 KIAA1024LP59773 190 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 MRPS25P82663 173 aaKnown RBP15.64■□□□□ 0.09
C9orf3-219ENST00000488186 CDK3Q00526 305 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 PPARDQ03181 441 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 CALCOCO2Q13137 446 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ITGA9Q13797 1035 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 FZD2Q14332 565 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 PTPRCAPQ14761 206 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ZNF423Q2M1K9 1284 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ZNF542PQ5EBM4 170 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 PCID2Q5JVF3 399 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 PDPK2PQ6A1A2 396 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 DOK6Q6PKX4 331 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 PELI3Q8N2H9 469 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 OR13C4Q8NGS5 318 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 OR2I1PQ8NGU4 316 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SNF8Q96H20 258 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 RANBP9Q96S59 729 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 RTKNQ9BST9 563 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 TEX101Q9BY14 249 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SLC13A1Q9BZW2 595 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 RAB17Q9H0T7 212 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 IL26Q9NPH9 171 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 NFKBIL1Q9UBC1 381 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ANAPC5Q9UJX4 755 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 SLC30A1Q9Y6M5 507 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 DCHS1Q96JQ0 3298 aa15.64■□□□□ 0.09
C9orf3-219ENST00000488186 ADAMTS9Q9P2N4 1935 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 CDX4O14627 284 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 TM4SF5O14894 197 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 GDF9O60383 454 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 ZNF883P0CG24 379 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 MLNP12872 115 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 CTSEP14091 401 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 JUNDP17535 347 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 MGAT1P26572 445 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 SRP54P61011 504 aaKnown RBP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 HNRNPKP61978 463 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 IL9RQ01113 521 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 SLC14A1Q13336 389 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 MSLNQ13421 630 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 PUM1Q14671 1186 aaKnown RBP eCLIP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 CHRNA6Q15825 494 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 RNASEH2BQ5TBB1 312 aaKnown RBP15.63■□□□□ 0.09
C9orf3-219ENST00000488186 STPG1Q5TH74 334 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 C8orf74Q6P047 294 aa15.63■□□□□ 0.09
C9orf3-219ENST00000488186 HOOK3Q86VS8 718 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms