RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TMEM68Q96MH6 324 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 TIGD1Q96MW7 591 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 LRFN5Q96NI6 719 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 OR2A14Q96R47 310 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 GAD1Q99259 594 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 SLC25A33Q9BSK2 321 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 PCGF1Q9BSM1 259 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 IFIH1Q9BYX4 1025 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 PLK3Q9H4B4 646 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 SH2D4AQ9H788 454 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 SYNCQ9H7C4 482 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 ACSS1Q9NUB1 689 aaPredicted RBP2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 OCIAD1Q9NX40 245 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 COPG2Q9UBF2 871 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 PADI3Q9ULW8 664 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 NENFQ9UMX5 172 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 R3HDM2Q9Y2K5 976 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 MAU2Q9Y6X3 613 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 TRIP12Q14669 1992 aaPredicted RBP2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 ARHGEF40Q8TER5 1519 aa2.88□□□□□ -1.95
R3HDM1-219ENST00000488035 NOTCH3Q9UM47 2321 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 AKR1B15C9JRZ8 316 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 NDUFS3O75489 264 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 TPPPO94811 219 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 EGFP01133 1207 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 AFPP02771 609 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 ACAA1P09110 424 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CSH1P0DML2 217 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CSH2P0DML3 217 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CD58P19256 250 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 GCH1P30793 250 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 STX2P32856 288 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 PSMB10P40306 273 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CAMPP49913 170 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 NAP1L1P55209 391 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SNX16P57768 344 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CDC16Q13042 620 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 IKQ13123 557 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 ACVR2BQ13705 512 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 CRYMQ14894 314 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 NFATC4Q14934 902 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 WTAPQ15007 396 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SOWAHCQ53LP3 525 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 GGNBP1Q5YKI7 109 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 METTL2BQ6P1Q9 378 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 WDR73Q6P4I2 378 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SARM1Q6SZW1 724 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 ENOSF1Q7L5Y1 443 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 AACSQ86V21 672 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 NRROSQ86YC3 692 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 DSELQ8IZU8 1212 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 BEST3Q8N1M1 668 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 C17orf53Q8N3J3 647 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SPATA22Q8NHS9 363 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 NEUROG1Q92886 237 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SCMH1Q96GD3 660 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 METTL2AQ96IZ6 378 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF479Q96JC4 524 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 MXD3Q9BW11 206 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SF3B5Q9BWJ5 86 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 LTB4R2Q9NPC1 389 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 PAG1Q9NWQ8 432 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 MTMR10Q9NXD2 777 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 C1RLQ9NZP8 487 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 PAM16Q9Y3D7 125 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 SESN1Q9Y6P5 492 aa2.87□□□□□ -1.95
R3HDM1-219ENST00000488035 A0A0U1RQJ8 604 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 K7ENM7 598 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SCAMP1O15126 338 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PLPP2O43688 288 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 JRKO75564 520 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SERPINI2O75830 405 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 KDM4BO94953 1096 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ICAM1P05362 532 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 HOXC6P09630 235 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 FGF3P11487 239 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ANXA7P20073 488 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 BDKRB2P30411 391 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 KCNJ4P48050 445 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 HNRNPH2P55795 449 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 TAS2R40P59535 323 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PRAMEP78395 509 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SPOCK1Q08629 439 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ACSM2AQ08AH3 577 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PLCB4Q15147 1175 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 NAB2Q15742 525 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 KRT24Q2M2I5 525 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ZSCAN23Q3MJ62 389 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 AMZ1Q400G9 498 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 RILPL1Q5EBL4 403 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 XKR9Q5GH70 373 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 PPP6R3Q5H9R7 873 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 RAB41Q5JT25 222 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 NSUN5P2Q63ZY6 315 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ACSM2BQ68CK6 577 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF324BQ6AW86 544 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 SIGIRRQ6IA17 410 aa2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 DUS1LQ6P1R4 473 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-219ENST00000488035 TMEM154Q6P9G4 183 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms