RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ABCG8Q9H221 673 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 SUDS3Q9H7L9 328 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 NLE1Q9NVX2 485 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 NINJ2Q9NZG7 142 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 SAMD15Q9P1V8 674 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 ZC3H7BQ9UGR2 993 aaKnown RBP12.74□□□□□ -0.37
HDAC6-229ENST00000486665 FKBPLQ9UIM3 349 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 ANGPTL2Q9UKU9 493 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 RIMKLBQ9ULI2 386 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
HDAC6-229ENST00000486665 IGF2RP11717 2491 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 MYLKQ15746 1914 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 ZCWPW2A0A1B0GU75 182 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 WNT9AO14904 365 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 RAD51BO15315 384 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 FOXD2O60548 495 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 TM7SF2O76062 418 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 IGHV4-34P06331 123 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 TUBBP07437 444 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PGAM1P18669 254 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 MCM3P25205 808 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 SSTR1P30872 391 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 CA5AP35218 305 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 XIAPP98170 497 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PDE1BQ01064 536 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 ACVR1Q04771 509 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 SMAD1Q15797 465 aaKnown RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 KYNUQ16719 465 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 ARMC3Q5W041 872 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 ALS2CLQ60I27 953 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 STEAP4Q687X5 459 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 KIAA1161Q6NSJ0 714 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 TRIM69Q86WT6 500 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PALM2Q8IXS6 379 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PELI3Q8N2H9 469 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 SCAMP4Q969E2 229 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 HDAC10Q969S8 669 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 DTD2Q96FN9 168 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 NAT9Q9BTE0 207 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 SLC17A9Q9BYT1 436 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 CDC42EP4Q9H3Q1 356 aaKnown RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 EBF2Q9HAK2 575 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 LRRC4CQ9HCJ2 640 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 IL26Q9NPH9 171 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PKD2L2Q9NZM6 624 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 IL1RAPL1Q9NZN1 696 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 FNDC3AQ9Y2H6 1198 aaKnown RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 PKP3Q9Y446 797 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 FAM169AQ9Y6X4 670 aa12.73□□□□□ -0.37
HDAC6-229ENST00000486665 TNRC6BQ9UPQ9 1833 aaKnown RBP12.73□□□□□ -0.37
HDAC6-229ENST00000486665 RGSL1A5PLK6 1076 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 OR51F1A6NGY5 319 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 GAPDHSO14556 408 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-229ENST00000486665 SLC31A1O15431 190 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 NDUFS2O75306 463 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 USP1O94782 785 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 FSBPO95073 299 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 POLBP06746 335 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 ARNTP27540 789 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 ARCN1P48444 511 aaKnown RBP12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CCR5P51681 352 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 PEX6Q13608 980 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CRYMQ14894 314 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 NUMA1Q14980 2115 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 SLMAPQ14BN4 828 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CHRNA6Q15825 494 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 WSCD2Q2TBF2 565 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 SPANXN3Q5MJ09 141 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CEP128Q6ZU80 1094 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 NRSN1Q8IZ57 195 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 PNPLA1Q8N8W4 532 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 RIOK2Q9BVS4 552 aaKnown RBP12.72□□□□□ -0.37
HDAC6-229ENST00000486665 FAM83DQ9H4H8 585 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
HDAC6-229ENST00000486665 PCDHGA5Q9Y5G8 931 aa12.72□□□□□ -0.37
HDAC6-229ENST00000486665 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 C4orf47A7E2U8 309 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 METTL12A8MUP2 240 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 GOLGA8KD6RF30 607 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 H7C0S8 307 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 K7ESM1 405 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 MAP3K13O43283 966 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 LATO43561 262 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 UGT1A9O60656 530 aa12.71□□□□□ -0.37
HDAC6-229ENST00000486665 VAPBO95292 243 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms