RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MAN1A1P33908 653 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 ETV5P41161 510 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 GPR3P46089 330 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 RPL26P61254 145 aaKnown RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 SLC10A2Q12908 348 aaPredicted RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 CLPPQ16740 277 aaPredicted RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 KIAA1614Q5VZ46 1190 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 USP53Q70EK8 1073 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 MARK2Q7KZI7 788 aaKnown RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 CCDC13Q8IYE1 715 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 LPCAT1Q8NF37 534 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 EXD1Q8NHP7 514 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 AGAP2Q99490 1192 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 RIOK2Q9BVS4 552 aaKnown RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 DEF6Q9H4E7 631 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 DTLQ9NZJ0 730 aa25.56■■□□□ 1.68
HLA-F-227ENST00000485513 AKAP7Q9P0M2 348 aaPredicted RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 RPL26L1Q9UNX3 145 aaKnown RBP25.56■■□□□ 1.68
HLA-F-227ENST00000485513 ZFC3H1O60293 1989 aaKnown RBP25.55■■□□□ 1.68
HLA-F-227ENST00000485513 CLDN7O95471 211 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 KDELR1P24390 212 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 MAPK10P53779 464 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 TGIF1Q15583 401 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 ASTE1Q2TB18 679 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-227ENST00000485513 PYCR3Q53H96 274 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 RAVER1Q8IY67 606 aaKnown RBP25.55■■□□□ 1.68
HLA-F-227ENST00000485513 OR8K1Q8NGG5 319 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 RAPGEF5Q92565 580 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 COX14Q96I36 57 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 ZNF830Q96NB3 372 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-227ENST00000485513 RNF157Q96PX1 679 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 NUDT22Q9BRQ3 303 aa25.55■■□□□ 1.68
HLA-F-227ENST00000485513 PRAMEF33A0A0G2JMD5 474 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 INPP4BO15327 924 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 PRAMEF10O60809 474 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 JCHAINP01591 159 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 TMEM253P0C7T8 217 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 LIPCP11150 499 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 MESDQ14696 234 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 C16orf72Q14CZ0 275 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 GALNT13Q8IUC8 556 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 USP7Q93009 1102 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 LYSMD1Q96S90 227 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 DNAJC7Q99615 494 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 COL6A6A6NMZ7 2263 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 ZNF462Q96JM2 2506 aa25.54■■□□□ 1.68
HLA-F-227ENST00000485513 C1orf232A0A0U1RR37 186 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 SSU72P8A0A1W2PR75 194 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 KCNK1O00180 336 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 PPM1DO15297 605 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 EFSO43281 561 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 ASMTLO95671 621 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 CD1CP29017 333 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 LRP8Q14114 963 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 TRIM14Q14142 442 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 LY6DQ14210 128 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 ZNF574Q6ZN55 896 aaPredicted RBP25.53■■□□□ 1.68
HLA-F-227ENST00000485513 ZNF605Q86T29 641 aa25.53■■□□□ 1.68
HLA-F-227ENST00000485513 ZNHIT6Q9NWK9 470 aaKnown RBP25.53■■□□□ 1.68
HLA-F-227ENST00000485513 IGHV5-10-1A0A0J9YXX1 117 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 LRRD1A4D1F6 860 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 AKR1B10O60218 316 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 PTMSP20962 102 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 CD86P42081 329 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 QPCTQ16769 361 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 FOXJ2Q9P0K8 574 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 SEPT10Q9P0V9 454 aa25.52■■□□□ 1.68
HLA-F-227ENST00000485513 C9orf172C9J069 976 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 HGSO14964 777 aaPredicted RBP25.51■■□□□ 1.67
HLA-F-227ENST00000485513 CBFA2T2O43439 604 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 MMP2P08253 660 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 SPINT3P49223 89 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 PPIDQ08752 370 aaKnown RBP25.51■■□□□ 1.67
HLA-F-227ENST00000485513 ZFAND4Q86XD8 727 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 PLD5Q8N7P1 536 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 RCBTB1Q8NDN9 531 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 SLC35G2Q8TBE7 412 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 CCHCR1Q8TD31 782 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 CCDC74BQ96LY2 380 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 WDR24Q96S15 920 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 MLPHQ9BV36 600 aaPredicted RBP25.51■■□□□ 1.67
HLA-F-227ENST00000485513 SEMA4CQ9C0C4 833 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 KCNK4Q9NYG8 393 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 PKD2L2Q9NZM6 624 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 VPS18Q9P253 973 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 ZNHIT2Q9UHR6 403 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 HEY1Q9Y5J3 304 aa25.51■■□□□ 1.67
HLA-F-227ENST00000485513 PIEZO2Q9H5I5 2752 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 IGHV1OR21-1A0A087WYE8 117 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 ZNF487B1APH4 448 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 ANKRD66B4E2M5 251 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 ATP1A1P05023 1023 aaKnown RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 CCL4P13236 92 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 LIMK2P53671 638 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 IFI35P80217 286 aaPredicted RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 ZBTB17Q13105 803 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 HENMT1Q5T8I9 393 aaKnown RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 TMEM164Q5U3C3 297 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 NKAIN2Q5VXU1 208 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 CNTD1Q8N815 330 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms