RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 UVRAGQ9P2Y5 699 aa13.2□□□□□ -0.3
UBA3-210ENST00000485424 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 MATN3O15232 486 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 PRAMEF10O60809 474 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 MAP3K6O95382 1288 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 WISP1O95388 367 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 ECEL1O95672 775 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 FGF1P05230 155 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 PDHA1P08559 390 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CD48P09326 243 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 TPM1P09493 284 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CCNCP24863 283 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 OR1D5P58170 312 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CTBSQ01459 385 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 DSC2Q02487 901 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 GALNT2Q10471 571 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 DPYSL3Q14195 570 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 PAFAH1B3Q15102 231 aaKnown RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 ANKRD20A8PQ5CZ79 823 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 VASH2Q86V25 355 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 GALNT13Q8IUC8 556 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 SLITRK4Q8IW52 837 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 LPCAT1Q8NF37 534 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 PIH1D2Q8WWB5 315 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 EXTL1Q92935 676 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 AHCYL2Q96HN2 611 aaKnown RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 MCCC1Q96RQ3 725 aaPredicted RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 ZNF670Q9BS34 389 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 STN1Q9H668 368 aaKnown RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 RDH14Q9HBH5 336 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 ZNHIT6Q9NWK9 470 aaKnown RBP13.19□□□□□ -0.3
UBA3-210ENST00000485424 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 CHKBQ9Y259 395 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
UBA3-210ENST00000485424 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 C9orf172C9J069 976 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 INPP4BO15327 924 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 TRBC1P01850 177 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 ITGB2P05107 769 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 PTMSP20962 102 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 CASP14P31944 242 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 ADCY8P40145 1251 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 PBX1P40424 430 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 GPR3P46089 330 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 POLD2P49005 469 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 KCNC4Q03721 635 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 PTPRRQ15256 657 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 CLPPQ16740 277 aaPredicted RBP13.18□□□□□ -0.3
UBA3-210ENST00000485424 TECPR1Q7Z6L1 1165 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 NRSN1Q8IZ57 195 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 USP7Q93009 1102 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
UBA3-210ENST00000485424 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 FAM117AQ9C073 453 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 ABCG8Q9H221 673 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 SEMA6CQ9H3T2 930 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 PKD2L2Q9NZM6 624 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 SLC17A4Q9Y2C5 497 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 TMEM98Q9Y2Y6 226 aa13.18□□□□□ -0.3
UBA3-210ENST00000485424 C1orf232A0A0U1RR37 186 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 AKR1B10O60218 316 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 FZD6O60353 706 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 PROSCO94903 275 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 GYPCP04921 128 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 WT1P19544 449 aaPredicted RBP13.17□□□□□ -0.3
UBA3-210ENST00000485424 IL4RP24394 825 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 CD82P27701 267 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 PTSQ03393 145 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 TRIM14Q14142 442 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 C16orf72Q14CZ0 275 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 NRROSQ86YC3 692 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 MAML1Q92585 1016 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 SCAMP4Q969E2 229 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 SLC38A3Q99624 504 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 DPYSL5Q9BPU6 564 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 TDRD1Q9BXT4 1180 aaKnown RBP13.17□□□□□ -0.3
UBA3-210ENST00000485424 ADGRE3Q9BY15 652 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 ZNHIT2Q9UHR6 403 aa13.17□□□□□ -0.3
UBA3-210ENST00000485424 HEMK1Q9Y5R4 338 aaPredicted RBP13.17□□□□□ -0.3
UBA3-210ENST00000485424 PRRC2CQ9Y520 2896 aaKnown RBP13.17□□□□□ -0.3
UBA3-210ENST00000485424 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
UBA3-210ENST00000485424 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms