RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NGLY1Q96IV0 654 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 OR52E6Q96RD3 313 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 PHB2Q99623 299 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 ERVK-5Q9HDB9 667 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 TNRQ92752 1358 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 EI24O14681 340 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 MLLT6P55198 1093 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-207ENST00000483888 LARGE2Q8N3Y3 721 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 OR2T12Q8NG77 320 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 ITCHQ96J02 903 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-207ENST00000483888 ANGPT4Q9Y264 503 aa10.23□□□□□ -0.77
COL12A1-207ENST00000483888 ERVK-7P63135 1459 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 DDX6P26196 483 aaKnown RBP eCLIP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 HARS2P49590 506 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 IDH3AP50213 366 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 PRKCEQ02156 737 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GRK1Q15835 563 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 HES5Q5TA89 166 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 UCK2Q9BZX2 261 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 UNC93B1Q9H1C4 597 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TBX20Q9UMR3 447 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ERVV-2B6SEH9 535 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GMDSO60547 372 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF35P13682 527 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 PTPN6P29350 595 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ECHS1P30084 290 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 BORAQ6PGQ7 559 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 PIWIL4Q7Z3Z4 852 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 CHERPQ8IWX8 916 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SERAC1Q96JX3 654 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 OMDQ99983 421 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF518BQ9C0D4 1074 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TUBG2Q9NRH3 451 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ICMTO60725 284 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 HMBSP08397 361 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SLC2A3P11169 496 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GRB10Q13322 594 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF410Q86VK4 478 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 RNF149Q8NC42 400 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SNIP1Q8TAD8 396 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 HPDLQ96IR7 371 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 DCP1AQ9NPI6 582 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 MLYCDO95822 493 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TMBIM6P55061 237 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TMEM236Q5W0B7 351 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GPALPP1Q8IXQ4 340 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 CERS2Q96G23 380 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ARPC5LQ9BPX5 153 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GFOD1Q9NXC2 390 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 FAM53CQ9NYF3 392 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 NUAK1O60285 661 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 JCHAINP01591 159 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ADAM8P78325 824 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 NAE1Q13564 534 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 MYLK3Q32MK0 819 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 VCPIP1Q96JH7 1222 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SLITRK1Q96PX8 696 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ELL3Q9HB65 397 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GGA3Q9NZ52 723 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 PRR12Q9ULL5 1215 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 RFPL1O75677 317 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 CD53P19397 219 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SLC6A2P23975 617 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 LIMK2P53671 638 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ORC1Q13415 861 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GFOD2Q3B7J2 385 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 IL23RQ5VWK5 629 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 RNF44Q7L0R7 432 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 DNAJB7Q7Z6W7 309 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 C14orf80Q86SX3 495 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 COMTD1Q86VU5 262 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 SPATA2LQ8IUW3 424 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 METTL25Q8N6Q8 603 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 STON2Q8WXE9 905 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 USP7Q93009 1102 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF347Q96SE7 839 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 NEDD8-MDP1E9PL57 170 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-207ENST00000483888 GPRC6AQ5T6X5 926 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 TMEM179Q6ZVK1 233 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 DPPA2Q7Z7J5 298 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 ZFP28Q8NHY6 868 aa10.22□□□□□ -0.77
COL12A1-207ENST00000483888 MUTP22033 750 aa10.21□□□□□ -0.77
COL12A1-207ENST00000483888 ERVK-25P63136 954 aa10.21□□□□□ -0.77
COL12A1-207ENST00000483888 RAPSNQ13702 412 aa10.21□□□□□ -0.77
COL12A1-207ENST00000483888 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
COL12A1-207ENST00000483888 ADNP2Q6IQ32 1131 aa10.21□□□□□ -0.77
COL12A1-207ENST00000483888 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms