RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GALNT5Q7Z7M9 940 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 SDCCAG8Q86SQ7 713 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 TEX11Q8IYF3 940 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 OR8K5Q8NH50 307 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 WFIKKN2Q8TEU8 576 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 WASF1Q92558 559 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 APBB2Q92870 758 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 CSF3RQ99062 836 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 GAD1Q99259 594 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 MAK16Q9BXY0 300 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 OR14J1Q9UGF5 321 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 SEC63Q9UGP8 760 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 FBXW11Q9UKB1 542 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 CMAHPQ9Y471 501 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 SNX8Q9Y5X2 465 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 ATXN2Q99700 1313 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 OR2A25A4D2G3 310 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 M0QZ24 198 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 KCNJ13O60928 360 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 NTN1O95631 604 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 EGFP01133 1207 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 PRCPP42785 496 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 SPOCK1Q08629 439 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 STK4Q13043 487 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 NFATC4Q14934 902 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 PNLIPRP3Q17RR3 467 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 EFHC1Q5JVL4 640 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 RARS2Q5T160 578 aaKnown RBP5.69□□□□□ -1.5
SF3B1-210ENST00000482158 LCN10Q6JVE6 187 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 CRELD2Q6UXH1 353 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-210ENST00000482158 FJX1Q86VR8 437 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 HACE1Q8IYU2 909 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 SCML4Q8N228 414 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 PCDH20Q8N6Y1 951 aaKnown RBP5.69□□□□□ -1.5
SF3B1-210ENST00000482158 CCDC89Q8N998 374 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 IL17RCQ8NAC3 791 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 FAM216AQ8WUB2 273 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 ZBTB9Q96C00 473 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 KXD1Q9BQD3 176 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 PDE7BQ9NP56 450 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 C1RLQ9NZP8 487 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 PADI3Q9ULW8 664 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 TMEM5Q9Y2B1 443 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 RABGAP1Q9Y3P9 1069 aa5.69□□□□□ -1.5
SF3B1-210ENST00000482158 TRIP12Q14669 1992 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SRRM3A6NNA2 597 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 OGG1O15527 345 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 ERAL1O75616 437 aaKnown RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 KCNK5O95279 499 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 BMP15O95972 392 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 AKR1B1P15121 316 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 BDKRB2P30411 391 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 APOBEC1P41238 236 aaKnown RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SLC15A1P46059 708 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SUOXP51687 545 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 MFAP4P55083 255 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 CSNK2A1P68400 391 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 IFI35P80217 286 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 MRPS5P82675 430 aaKnown RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 DDR1Q08345 913 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 BECN1Q14457 450 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 PCLAFQ15004 111 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 DECR1Q16698 335 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 NSUN5P2Q63ZY6 315 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 FRG2Q64ET8 278 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 WDR73Q6P4I2 378 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 KCTD18Q6PI47 426 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 LINC00346Q8IVM7 164 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 TAGAPQ8N103 731 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 Q8N9P0 234 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 POC5Q8NA72 575 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 ZNF114Q8NC26 417 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 C1orf131Q8NDD1 294 aaKnown RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 CSNK2A3Q8NEV1 391 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SPATA22Q8NHS9 363 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 LRRC59Q96AG4 307 aaKnown RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 ORAI1Q96D31 301 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 PHF21BQ96EK2 531 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SAT2Q96F10 170 aaPredicted RBP5.68□□□□□ -1.5
SF3B1-210ENST00000482158 SCMH1Q96GD3 660 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 FEM1CQ96JP0 617 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 PCYT2Q99447 389 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 IL25Q9H293 177 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 MAGIXQ9H6Y5 334 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 RPS6KA6Q9UK32 745 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 PADI1Q9ULC6 663 aa5.68□□□□□ -1.5
SF3B1-210ENST00000482158 B4DLN1 442 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 CTDSP2O14595 271 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 FIBPO43427 364 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 MITFO75030 526 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 TMCC2O75069 709 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE7O76087 117 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 HIST1H2ABP04908 130 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 ALPLP05186 524 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 ADRB2P07550 413 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 HIST1H2ADP20671 130 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms