RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ABCG8Q9H221 673 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 FAM83DQ9H4H8 585 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 MRPL40Q9NQ50 206 aaKnown RBP11.39□□□□□ -0.59
CCM2-213ENST00000480658 TAAR2Q9P1P5 351 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 ITPR1Q14643 2758 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 LAMA5O15230 3695 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 TTC24A2A3L6 582 aaPredicted RBP11.38□□□□□ -0.59
CCM2-213ENST00000480658 ERVH48-1M5A8F1 160 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 KCNK1O00180 336 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 NVLO15381 856 aaKnown RBP11.38□□□□□ -0.59
CCM2-213ENST00000480658 TNFSF15O95150 251 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCM2-213ENST00000480658 EPOP01588 193 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 MYF5P13349 255 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ACTR1BP42025 376 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 MAGEA1P43355 309 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 SPINT3P49223 89 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 PDX1P52945 283 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ACTR1AP61163 376 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 SKOR1P84550 965 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 CDK18Q07002 472 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 CCDC173Q0VFZ6 552 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 TBX2Q13207 712 aaPredicted RBP11.38□□□□□ -0.59
CCM2-213ENST00000480658 PPP2R5EQ16537 467 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 TEX44Q53QW1 395 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 HENMT1Q5T8I9 393 aaKnown RBP11.38□□□□□ -0.59
CCM2-213ENST00000480658 TMTC1Q8IUR5 882 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 CCDC50Q8IVM0 306 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 KATNAL2Q8IYT4 538 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 DTX3LQ8TDB6 740 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 UBE2Q2Q8WVN8 375 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 MRFAP1L1Q96HT8 127 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 COX14Q96I36 57 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 PLEKHG4BQ96PX9 1271 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 PANX2Q96RD6 677 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 CHP1Q99653 195 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ZCCHC2Q9C0B9 1178 aaKnown RBP11.38□□□□□ -0.59
CCM2-213ENST00000480658 ZMYND15Q9H091 742 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 CARD9Q9H257 536 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 PRORYQ9H606 182 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 HACD3Q9P035 362 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 TRHDEQ9UKU6 1024 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 LRRK1Q38SD2 2015 aa11.38□□□□□ -0.59
CCM2-213ENST00000480658 ARID1BQ8NFD5 2236 aaPredicted RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 KIR2DS5A0A0G2JLQ3 304 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 A0A0G2JNG1 304 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 C3orf70A6NLC5 250 aaPredicted RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 GOLGA6L6A8MZA4 724 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 KIR2DS3K7RE56 304 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 KLK10O43240 276 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 DUX1O43812 170 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 STK10O94804 968 aaKnown RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 MAP3K6O95382 1288 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 ASMTLO95671 621 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 SOD1P00441 154 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 VCLP18206 1134 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 COMTP21964 271 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 ADCY8P40145 1251 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 CDKN2BP42772 138 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 EPHA4P54764 986 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 CCL7P80098 99 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 CTBSQ01459 385 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 XRCC4Q13426 336 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 SQSTM1Q13501 440 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 KIR2DS5Q14953 304 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 PRKD1Q15139 912 aaPredicted RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 QPCTQ16769 361 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 PYCR3Q53H96 274 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 DOK6Q6PKX4 331 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 SLC30A9Q6PML9 568 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 TRAM1L1Q8N609 369 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 OR4D9Q8NGE8 314 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 OR10G6Q8NH81 332 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 NSMCE3Q96MG7 304 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 RIOK2Q9BVS4 552 aaKnown RBP11.37□□□□□ -0.59
CCM2-213ENST00000480658 GPR63Q9BZJ6 419 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 CD84Q9UIB8 345 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 LOXL2Q9Y4K0 774 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 RNF215Q9Y6U7 377 aa11.37□□□□□ -0.59
CCM2-213ENST00000480658 ACACAQ13085 2346 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 DSPP15924 2871 aaKnown RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 A0A1W2PQM1 296 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 KLHL33A6NCF5 533 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 BTNL10A8MVZ5 291 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ATXN7O15265 892 aaPredicted RBP11.36□□□□□ -0.59
CCM2-213ENST00000480658 VEGFDO43915 354 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CST8O60676 142 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 KCNJ13O60928 360 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 CLDN7O95471 211 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 ECEL1O95672 775 aa11.36□□□□□ -0.59
CCM2-213ENST00000480658 NDST3O95803 873 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms