RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 POU6F1Q14863 301 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 KCTD19Q17RG1 926 aaPredicted RBP19.63■□□□□ 0.73
LIME1-205ENST00000480139 RNASEH2BQ5TBB1 312 aaKnown RBP19.63■□□□□ 0.73
LIME1-205ENST00000480139 MAATS1Q7Z4T9 603 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 HOOK3Q86VS8 718 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 NAT8LQ8N9F0 302 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 NETO1Q8TDF5 533 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 PEX13Q92968 403 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 COX14Q96I36 57 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 HIC2Q96JB3 615 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 AGAP2Q99490 1192 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 SPATA16Q9BXB7 569 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 BPIFA1Q9NP55 256 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 IL26Q9NPH9 171 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 PIH1D1Q9NWS0 290 aaKnown RBP19.63■□□□□ 0.73
LIME1-205ENST00000480139 RIMKLBQ9ULI2 386 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 KNL1Q8NG31 2342 aa19.63■□□□□ 0.73
LIME1-205ENST00000480139 PTPRZ1P23471 2315 aaPredicted RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 HEATR9A2RTY3 570 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 FAM187AA6NFU0 413 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 FADS2P1A8MWK0 482 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 DNALI1O14645 258 aaPredicted RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 TNFRSF10CO14798 259 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 TMEM63AO94886 807 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 CSF2P04141 144 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 NME1P15531 152 aaKnown RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 NPY2RP49146 381 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 C2orf54Q08AI8 447 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 EIF2B5Q13144 721 aaKnown RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 CERCAMQ5T4B2 595 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 STPG1Q5TH74 334 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 ANKRD22Q5VYY1 191 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 ALS2CLQ60I27 953 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 OR4K2Q8NGD2 314 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 OR2I1PQ8NGU4 316 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 STYXQ8WUJ0 223 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 TBATAQ96M53 351 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 VPS35Q96QK1 796 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 LGR4Q9BXB1 951 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 IL22Q9GZX6 179 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 IL21RQ9HBE5 538 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 XAB2Q9HCS7 855 aaKnown RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 NLE1Q9NVX2 485 aaPredicted RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 APPL1Q9UKG1 709 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 FNDC3AQ9Y2H6 1198 aaKnown RBP19.62■□□□□ 0.73
LIME1-205ENST00000480139 PCDHGB2Q9Y5G2 931 aa19.62■□□□□ 0.73
LIME1-205ENST00000480139 GLYATL1P3A0A0U1RQE8 302 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 H7C0S8 307 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 SMAPO00193 183 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 GAPDHSO14556 408 aaPredicted RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 BUD23O43709 281 aaKnown RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 PCDHGA12O60330 932 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 ADRA1DP25100 572 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 BLKP51451 505 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 SHBQ15464 509 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 NLRP9Q7RTR0 991 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 OR56A4Q8NGH8 313 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 PTCD2Q8WV60 388 aaKnown RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 BTN2A2Q8WVV5 523 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 FRMD8Q9BZ67 464 aaPredicted RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 TM7SF3Q9NS93 570 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 BFARQ9NZS9 450 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 CNOT6Q9ULM6 557 aaKnown RBP19.61■□□□□ 0.73
LIME1-205ENST00000480139 KCTD3Q9Y597 815 aa19.61■□□□□ 0.73
LIME1-205ENST00000480139 TMEM202A6NGA9 273 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 C4orf47A7E2U8 309 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 H3BM21 787 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 NDC80O14777 642 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 SDHBP21912 280 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 EPHA8P29322 1005 aaPredicted RBP19.6■□□□□ 0.73
LIME1-205ENST00000480139 HNRNPKP61978 463 aaKnown RBP eCLIP19.6■□□□□ 0.73
LIME1-205ENST00000480139 ITGA9Q13797 1035 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 SEPT6Q14141 434 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 PTPRCAPQ14761 206 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 PCID2Q5JVF3 399 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 ENPP7Q6UWV6 458 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 CAND1Q86VP6 1230 aaKnown RBP19.6■□□□□ 0.73
LIME1-205ENST00000480139 MNS1Q8NEH6 495 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 PPHLN1Q8NEY8 458 aaKnown RBP19.6■□□□□ 0.73
LIME1-205ENST00000480139 OR13C4Q8NGS5 318 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 GLYATL1Q969I3 302 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 TRIM51Q9BSJ1 452 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 SMOXQ9NWM0 555 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 DNAJC28Q9NX36 388 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 VPS18Q9P253 973 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 KLQ9UEF7 1012 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 SLC17A4Q9Y2C5 497 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 TCAF1Q9Y4C2 921 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 DGKBQ9Y6T7 804 aa19.6■□□□□ 0.73
LIME1-205ENST00000480139 PLXNB3Q9ULL4 1909 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 RAD51CO43502 376 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 ZNF500O60304 480 aaPredicted RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 RASGRP1O95267 797 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 PRAMEF1O95521 474 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 MAGEA3P43357 314 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 TERF1P54274 439 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 SESN2P58004 480 aaPredicted RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 XIAPP98170 497 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 PPARDQ03181 441 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms