RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ADCY4Q8NFM4 1077 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 FAM45AQ8TCE6 357 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 TWIST2Q8WVJ9 160 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 CANT1Q8WVQ1 401 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 BHMTQ93088 406 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 CCDC126Q96EE4 140 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 L3HYPDHQ96EM0 354 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.68
VPS52-217ENST00000478934 Q9H521 79 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 ETAA1Q9NY74 926 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 IL37Q9NZH6 218 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 EPS15L1Q9UBC2 864 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 RAB26Q9ULW5 256 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 COMMD3-BMI1R4GMX3 469 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 V9GYQ6 96 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 A0A0J9YYE9 177 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 NPEPPSL1A6NEC2 478 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 AKAP10O43572 662 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 NIPSNAP2O75323 286 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 SUPT3HO75486 399 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 RHOBTB1O94844 696 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 CLIC3O95833 236 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 IGLV3-27P01718 113 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 KLKB1P03952 638 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 IRF1P10914 325 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 ATP6V1B2P21281 511 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 C18orf21Q32NC0 220 aaPredicted RBP10.77□□□□□ -0.69
VPS52-217ENST00000478934 CLYBLQ8N0X4 340 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 EFHBQ8N7U6 833 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 BRSK1Q8TDC3 778 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 VPS33AQ96AX1 596 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 PPP1R2P1Q96PQ5 205 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 TRIB3Q96RU7 358 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 HBEGFQ99075 208 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 GPR21Q99679 349 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 TMEM79Q9BSE2 394 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 SPAG4Q9NPE6 437 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.69
VPS52-217ENST00000478934 SLAMF8Q9P0V8 285 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 CD300AQ9UGN4 299 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 CROTQ9UKG9 612 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 CNOT6Q9ULM6 557 aaKnown RBP10.77□□□□□ -0.69
VPS52-217ENST00000478934 USP22Q9UPT9 525 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 SQORQ9Y6N5 450 aa10.77□□□□□ -0.69
VPS52-217ENST00000478934 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 TANC1Q9C0D5 1861 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 FAM92AA1XBS5 289 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 CBX4O00257 560 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 NME4O00746 187 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 SOCS2O14508 198 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 ECI2O75521 394 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 SEC24DO94855 1032 aaPredicted RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 TNFAIP8O95379 198 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 EOMESO95936 686 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 PRLP01236 227 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 GNAO1P09471 354 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 PSMC3P17980 439 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 STC1P52823 247 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 MRPL58Q14197 206 aaKnown RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 GPNMBQ14956 572 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 PARP15Q460N3 678 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 SPPL2CQ8IUH8 684 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 PHYKPLQ8IUZ5 450 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 SIDT2Q8NBJ9 832 aaKnown RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 DBF4BQ8NFT6 615 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 TUBGCP3Q96CW5 907 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 DGCR14Q96DF8 476 aaKnown RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 CDK15Q96Q40 435 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 AARSD1Q9BTE6 412 aaKnown RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 SARS2Q9NP81 518 aaKnown RBP10.76□□□□□ -0.69
VPS52-217ENST00000478934 TMEM181Q9P2C4 612 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 ZNF225Q9UK10 706 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 ARHGEF37A1IGU5 675 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 AZIN1O14977 448 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 INPPL1O15357 1258 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 CA12O43570 354 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 PRAMEF12O95522 483 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 SERPINF2P08697 491 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 HGFP14210 728 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 CASP2P42575 452 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 FAM189BP81408 668 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 GNA12Q03113 381 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 ACVR1Q04771 509 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 IKBKEQ14164 716 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 MRNIPQ6NTE8 343 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 LPCAT1Q8NF37 534 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 FEM1CQ96JP0 617 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 FAR2Q96K12 515 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 POLG2Q9UHN1 485 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 RNF112Q9ULX5 631 aa10.76□□□□□ -0.69
VPS52-217ENST00000478934 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 F5H5T6 163 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 H3BNC9 293 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms