RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FAM151BQ6UXP7 276 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 RANBP10Q6VN20 620 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PPP1R21Q6ZMI0 780 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF765Q7L2R6 523 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TMC3Q7Z5M5 1100 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 NRSN1Q8IZ57 195 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DNAAF3Q8N9W5 541 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 GPR26Q8NDV2 337 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 OR56A4Q8NGH8 313 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ATL2Q8NHH9 583 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 LMX1AQ8TE12 382 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 C16orf45Q96MC5 204 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TRABDQ9H4I3 376 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SLC32A1Q9H598 525 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CYP4F12Q9HCS2 524 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ARFGAP3Q9NP61 516 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HACD3Q9P035 362 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TTC7AQ9ULT0 858 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DRG1Q9Y295 367 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PKP3Q9Y446 797 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PCDHGB2Q9Y5G2 931 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SAR1BQ9Y6B6 198 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 COL5A1P20908 1838 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 SPAARA0A1B0GVQ0 90 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PRSS38A1L453 326 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CCDC78A2IDD5 438 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 C2orf81A6NN90 581 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 FADS2P1A8MWK0 482 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TM4SF5O14894 197 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 STX7O15400 261 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 GPR39O43194 453 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 AQP9O43315 295 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PHF2O75151 1096 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 RASGRP1O95267 797 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KCNK5O95279 499 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ASMTLO95671 621 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CELA2BP08218 269 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CTSEP14091 401 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 BPIP17213 487 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KELP23276 732 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CASQ1P31415 396 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HMGCLP35914 325 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 COILP38432 576 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 POLD2P49005 469 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HK3P52790 923 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TMPRSS15P98073 1019 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PTPRCAPQ14761 206 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 POU6F1Q14863 301 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DEFB133Q30KQ1 61 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HS1BP3Q53T59 392 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CCDC157Q569K6 752 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PAPD7Q5XG87 772 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DENND5AQ6IQ26 1287 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ADAMTSL4Q6UY14 1074 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PIP4P1Q86T03 277 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TTC30BQ8N4P2 665 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 OR52K1Q8NGK4 314 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 OR1E3Q8WZA6 343 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 HIC2Q96JB3 615 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ZSCAN5AQ9BUG6 496 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 LRRC61Q9BV99 259 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TEX101Q9BY14 249 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 DDX47Q9H0S4 455 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KCND1Q9NSA2 647 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 FTSJ1Q9UET6 329 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 TMEM98Q9Y2Y6 226 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 KCTD3Q9Y597 815 aa6.86□□□□□ -1.31
BRCA1-215ENST00000478531 ASXL3Q9C0F0 2248 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PIKFYVEQ9Y2I7 2098 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 RP1P56715 2156 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 RGSL1A5PLK6 1076 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 ERI2A8K979 691 aaKnown RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 CCL22O00626 93 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PSMD3O43242 534 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 CRTAMO95727 393 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 KRT14P02533 472 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PYGLP06737 847 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SPAM1P38567 509 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 GRIA1P42261 906 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 GNPDA1P46926 289 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 BLKP51451 505 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 DCDC1P59894 354 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SIM1P81133 766 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 CDH17Q12864 832 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 GPS1Q13098 491 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PDAP1Q13442 181 aaKnown RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 SEMA5AQ13591 1074 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 PPP1R7Q15435 360 aa6.85□□□□□ -1.31
BRCA1-215ENST00000478531 TAF1AQ15573 450 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 TRIP6Q15654 476 aaKnown RBP6.85□□□□□ -1.31
BRCA1-215ENST00000478531 CCDC38Q502W7 563 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms