RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TDP1Q9NUW8 608 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 PANK4Q9NVE7 773 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 FANCLQ9NW38 375 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 ASNSD1Q9NWL6 643 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 THG1LQ9NWX6 298 aaKnown RBP5.93□□□□□ -1.46
TRA2B-211ENST00000477939 GDAP2Q9NXN4 497 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 HSPBP1Q9NZL4 362 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 OR6C2Q9NZP2 312 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 IPO11Q9UI26 975 aaKnown RBP5.93□□□□□ -1.46
TRA2B-211ENST00000477939 ZMYM5Q9UJ78 669 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 RCOR1Q9UKL0 485 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 MAGED2Q9UNF1 606 aaPredicted RBP5.93□□□□□ -1.46
TRA2B-211ENST00000477939 MTMR6Q9Y217 621 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 POLHQ9Y253 713 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 PLAAQ9Y263 795 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 TBC1D30Q9Y2I9 924 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 WBP11Q9Y2W2 641 aaKnown RBP5.93□□□□□ -1.46
TRA2B-211ENST00000477939 SESN1Q9Y6P5 492 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 FREM2Q5SZK8 3169 aa5.93□□□□□ -1.46
TRA2B-211ENST00000477939 NUP205Q92621 2012 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 A0A1W2PQ67 120 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 C2orf78A6NCI8 922 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 USP27XA6NNY8 438 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 H7C0C1 242 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC30A4O14863 429 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ARHGAP6O43182 974 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SCO2O43819 266 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 BRINP1O60477 761 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 HUS1O60921 280 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ATP2C2O75185 946 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 RPP40O75818 363 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CALB1P05937 261 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CKMP06732 381 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ADRB1P08588 477 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 TMEM191BP0C7N4 346 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 XPAP23025 273 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 LMO2P25791 158 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PCSK1P29120 753 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GJA4P35212 333 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 MDH1P40925 334 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 RAP1GAPP47736 663 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 POU3F4P49335 361 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GALK1P51570 392 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ZNF135P52742 658 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 COPB1P53618 953 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 EMP3P54852 163 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ZXDBP98169 803 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 MYL7Q01449 175 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 TYRO3Q06418 890 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CKAP4Q07065 602 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CBLBQ13191 982 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 NAB1Q13506 487 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 EFTUD2Q15029 972 aaKnown RBP eCLIP5.92□□□□□ -1.466e-6■■□□□ 13.1
TRA2B-211ENST00000477939 SLC39A14Q15043 492 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PDGFRLQ15198 375 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 TLR1Q15399 786 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SF3B4Q15427 424 aaKnown RBP eCLIP5.92□□□□□ -1.461e-10■■□□□ 14.5
TRA2B-211ENST00000477939 CCDC6Q16204 474 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SMU1Q2TAY7 513 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 EML3Q32P44 896 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 MDH1BQ5I0G3 518 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 FAM209BQ5JX69 171 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 HES5Q5TA89 166 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PTRHD1Q6GMV3 140 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 RAB12Q6IQ22 244 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PRMT9Q6P2P2 845 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ARHGAP11AQ6P4F7 1023 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GALNTL5Q7Z4T8 443 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CPLX4Q7Z7G2 160 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PRUNE1Q86TP1 453 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 KBTBD6Q86V97 674 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC22A9Q8IVM8 553 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CCDC36Q8IYA8 594 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CLEC4FQ8N1N0 589 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GPD1LQ8N335 351 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SRFBP1Q8NEF9 429 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC24A4Q8NFF2 622 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PDCD6IPQ8WUM4 868 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 HEXDCQ8WVB3 486 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC44A1Q8WWI5 657 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 HDAC2Q92769 488 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 MYLPFQ96A32 169 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC22A18Q96BI1 424 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC25A36Q96CQ1 311 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 FUBP3Q96I24 572 aaKnown RBP eCLIP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ZFRQ96KR1 1074 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 ZNF578Q96N58 590 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 HHIPQ96QV1 700 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CYP2S1Q96SQ9 504 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PIP5K1AQ99755 562 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 SLC4A5Q9BY07 1137 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GPR61Q9BZJ8 451 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 TRIM9Q9C026 710 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 GRIP2Q9C0E4 1043 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 PAIP1Q9H074 479 aaKnown RBP5.92□□□□□ -1.46
TRA2B-211ENST00000477939 NUP62CLQ9H1M0 184 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CAB39LQ9H9S4 337 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 CRTAC1Q9NQ79 661 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 RXFP3Q9NSD7 469 aa5.92□□□□□ -1.46
TRA2B-211ENST00000477939 NUDT15Q9NV35 164 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms