RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 DNASE2BQ8WZ79 361 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 SCAMP4Q969E2 229 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 STAMBPL1Q96FJ0 436 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 PLEKHG4BQ96PX9 1271 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 RIOK2Q9BVS4 552 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 CDH19Q9H159 772 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 ABCG8Q9H221 673 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 MRM3Q9HC36 420 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 MBNL1Q9NR56 388 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 SOX13Q9UN79 622 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 CHMP2BQ9UQN3 213 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 ZFC3H1O60293 1989 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 PCDH15Q96QU1 1955 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 PIKFYVEQ9Y2I7 2098 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 GLYATL1P3A0A0U1RQE8 302 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 A6NNZ2 444 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 H0Y8X5 98 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 FPGTO14772 594 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 GDF9O60383 454 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 HADHAP40939 763 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 CLDN2P57739 230 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 PDIA2Q13087 525 aaKnown RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 CUL1Q13616 776 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 ARMC3Q5W041 872 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 KYAT3Q6YP21 454 aaKnown RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 KDM7AQ6ZMT4 941 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 CENPUQ71F23 418 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 CCDC25Q86WR0 208 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 PIGKQ92643 395 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 ZNF669Q96BR6 464 aaPredicted RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 CENPTQ96BT3 561 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 ZNF778Q96MU6 729 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 LENG8Q96PV6 779 aaPredicted RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 TRIM56Q9BRZ2 755 aaKnown RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 KIFC1Q9BW19 673 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 SPATA16Q9BXB7 569 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 FAM83DQ9H4H8 585 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 TM9SF3Q9HD45 589 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 GDF3Q9NR23 364 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 CHRAC1Q9NRG0 131 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 ZDHHC18Q9NUE0 388 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 NLE1Q9NVX2 485 aaPredicted RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 MTRF1LQ9UGC7 380 aaKnown RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 SLC2A6Q9UGQ3 507 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 SUSD2Q9UGT4 822 aa15.25■□□□□ 0.03
SEC13-215ENST00000477547 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEC13-215ENST00000477547 V9GYY5 206 aaPredicted RBP15.25■□□□□ 0.03
SEC13-215ENST00000477547 TDRD6O60522 2096 aaKnown RBP15.24■□□□□ 0.03
SEC13-215ENST00000477547 K7ESM1 405 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 EPN2O95208 641 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 TSHRP16473 764 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PGAM1P18669 254 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 NMBRP28336 390 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 DPP6P42658 865 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 GPR1P46091 355 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 CARSP49589 748 aaKnown RBP15.24■□□□□ 0.03
SEC13-215ENST00000477547 RACK1P63244 317 aaKnown RBP15.24■□□□□ 0.03
SEC13-215ENST00000477547 TUBB4BP68371 445 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 DPTQ07507 201 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 FASTKD3Q14CZ7 662 aaKnown RBP15.24■□□□□ 0.03
SEC13-215ENST00000477547 SKIDA1Q1XH10 827 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 LAIR1Q6GTX8 287 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 LAYNQ6UX15 382 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PELI3Q8N2H9 469 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PLA2G15Q8NCC3 412 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 OR13J1Q8NGT2 312 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 UBXN4Q92575 508 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PEX13Q92968 403 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 LRRC39Q96DD0 335 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 SIGLEC10Q96LC7 697 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 FMO2Q99518 471 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 C19orf43Q9BQ61 176 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
SEC13-215ENST00000477547 ZSCAN5AQ9BUG6 496 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 FOXP3Q9BZS1 431 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 PHACTR1Q9C0D0 580 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 WDR26Q9H7D7 661 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 SAYSD1Q9NPB0 183 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 TREX1Q9NSU2 369 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 RIMKLBQ9ULI2 386 aa15.24■□□□□ 0.03
SEC13-215ENST00000477547 FRYQ5TBA9 3013 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ATRXP46100 2492 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 FAM237BA0A1B0GVD1 139 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 POM121BA6NF01 834 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 FADS2P1A8MWK0 482 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 E7ESA3 106 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 GAPDHSO14556 408 aaPredicted RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 EIF3HO15372 352 aaKnown RBP eCLIP15.23■□□□□ 0.03
SEC13-215ENST00000477547 BCAT2O15382 392 aaPredicted RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 GPR39O43194 453 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 SOD1P00441 154 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 PYGLP06737 847 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 HOXB3P14651 431 aaPredicted RBP15.23■□□□□ 0.03
SEC13-215ENST00000477547 GNSP15586 552 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ITGALP20701 1170 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 ECHS1P30084 290 aa15.23■□□□□ 0.03
SEC13-215ENST00000477547 MC4RP32245 332 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms