RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 WRAP53Q9BUR4 548 aaKnown RBP16.85■□□□□ 0.29
EPHB4-204ENST00000477446 ACTR5Q9H9F9 607 aaPredicted RBP16.85■□□□□ 0.29
EPHB4-204ENST00000477446 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
EPHB4-204ENST00000477446 TRPM6Q9BX84 2022 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 SDR42E2A6NKP2 422 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 C10orf142B7Z368 130 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 SNX3O60493 162 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 RNGTTO60942 597 aaKnown RBP16.84■□□□□ 0.29
EPHB4-204ENST00000477446 KRT37O76014 449 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 CYP2A6P11509 494 aaPredicted RBP16.84■□□□□ 0.29
EPHB4-204ENST00000477446 KRT4P19013 534 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 LHCGRP22888 699 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 VIPR1P32241 457 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 GRIA1P42261 906 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 SERPINB9P50453 376 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 PPP2CBP62714 309 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 PPP2CAP67775 309 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 CRTC1Q6UUV9 634 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 TSPAN33Q86UF1 283 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 OR52K1Q8NGK4 314 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 GSDMBQ8TAX9 411 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 MZB1Q8WU39 189 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 MTBPQ96DY7 904 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 LYSMD1Q96S90 227 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 MAGEE1Q9HCI5 957 aa16.84■□□□□ 0.29
EPHB4-204ENST00000477446 ZFR2Q9UPR6 939 aaKnown RBP16.84■□□□□ 0.29
EPHB4-204ENST00000477446 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 A0A1W2PQU0 124 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 AP3B1O00203 1094 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 MMP20O60882 483 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 AVILO75366 819 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 CNTFP26441 200 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 LIG3P49916 1009 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 WDR4P57081 412 aaKnown RBP16.83■□□□□ 0.28
EPHB4-204ENST00000477446 CDKN3Q16667 212 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 KBTBD12Q3ZCT8 623 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 LACTB2Q53H82 288 aaPredicted RBP16.83■□□□□ 0.28
EPHB4-204ENST00000477446 HHATQ5VTY9 493 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 SEL1L3Q68CR1 1132 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 KIAA0895LQ68EN5 471 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 ZNF449Q6P9G9 518 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 LIPIQ6XZB0 460 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 C11orf74Q86VG3 221 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 HORMAD1Q86X24 394 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 TMEFF1Q8IYR6 380 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 CADM4Q8NFZ8 388 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 CXorf40AQ8TE69 158 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 CFAP36Q96G28 342 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
EPHB4-204ENST00000477446 PIH1D1Q9NWS0 290 aaKnown RBP16.83■□□□□ 0.28
EPHB4-204ENST00000477446 SPO11Q9Y5K1 396 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 R4GN57 208 aa16.83■□□□□ 0.28
EPHB4-204ENST00000477446 A0A1W2PPM1 405 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 IGLON5A6NGN9 336 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 METTL12A8MUP2 240 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 SPAG7O75391 227 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 FSBPO95073 299 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 IGHV4-34P06331 123 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 SNRPAP09012 282 aaKnown RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 MAT2AP31153 395 aaKnown RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 RPS21P63220 83 aaKnown RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 SLC18A2Q05940 514 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 MSLNQ13421 630 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 NAB1Q13506 487 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 CNGA3Q16281 694 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 PDK4Q16654 411 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 RNF187Q5TA31 235 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 STEAP4Q687X5 459 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 KIAA1161Q6NSJ0 714 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 ZNF534Q76KX8 674 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 CEP68Q76N32 757 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 TRIM69Q86WT6 500 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 SLC41A1Q8IVJ1 513 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 GDAP1Q8TB36 358 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 BIRC7Q96CA5 298 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 MRRFQ96E11 262 aaKnown RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 PCED1AQ9H1Q7 454 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 DUSP15Q9H1R2 295 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-204ENST00000477446 CASS4Q9NQ75 786 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 SPAG17Q6Q759 2223 aa16.82■□□□□ 0.28
EPHB4-204ENST00000477446 MYLKQ15746 1914 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 C1orf232A0A0U1RR37 186 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CCT8L1PA6NM43 557 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 FOXO6A8MYZ6 492 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 KRT38O76015 456 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CLDN7O95471 211 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 C1QAP02745 245 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ELFN1P0C7U0 828 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 C6P13671 934 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 TPH1P17752 444 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 TAC1P20366 129 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CCR5P51681 352 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 PTSQ03393 145 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CDH17Q12864 832 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 DNAJC3Q13217 504 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ARHGEF7Q14155 803 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZNF284Q2VY69 593 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms