RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 RAB3IL1Q8TBN0 382 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 MYRFLQ96LU7 910 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 PPP1R2P1Q96PQ5 205 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 MRPL57Q9BQC6 102 aaKnown RBP13.36□□□□□ -0.27
HDAC7-221ENST00000477203 DRC3Q9H069 523 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 VCX3BQ9H321 246 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 VCX3AQ9NNX9 186 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 TANC1Q9C0D5 1861 aa13.36□□□□□ -0.27
HDAC7-221ENST00000477203 C2orf81A6NN90 581 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 GRID2O43424 1007 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 UGT1A6P19224 532 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 UGT1A1P22309 533 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 UGT1A4P22310 534 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 UGT1A3P35503 534 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 UGT1A5P35504 534 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 OR4D1Q15615 310 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 ARMC12Q5T9G4 340 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 IRGCQ6NXR0 463 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SNX32Q86XE0 403 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SIDT2Q8NBJ9 832 aaKnown RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SORCS1Q8WY21 1168 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TTC1Q99614 292 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SLC46A2Q9BY10 475 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 MTG2Q9H4K7 406 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SUPT3HB4E1H0 165 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TARM1B6A8C7 271 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 CDC7O00311 574 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 CRTAMO95727 393 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 EFEMP2O95967 443 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 CTNNB1P35222 781 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 ECT2LQ008S8 904 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TECRLQ5HYJ1 363 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 DEFB107AQ8IZN7 70 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 PTGR2Q8N8N7 351 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 RIN3Q8TB24 985 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 DTNBP1Q96EV8 351 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TRIB3Q96RU7 358 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 APOL5Q9BWW9 433 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 LINC00597Q9H2U6 94 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 ABCB8Q9NUT2 735 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 SSX2IPQ9Y2D8 614 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 RAP2CQ9Y3L5 183 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 CCDC160A6NGH7 325 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 HDAC3O15379 428 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 CA5AP35218 305 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TSNQ15631 228 aaKnown RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 LRRC36Q1X8D7 754 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 EPGNQ6UW88 154 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 LAYNQ6UX15 382 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 TCEAL8Q8IYN2 117 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
HDAC7-221ENST00000477203 HBEGFQ99075 208 aa13.35□□□□□ -0.27
HDAC7-221ENST00000477203 NEDD8-MDP1E9PL57 170 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 IL1BP01584 269 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 NUDT2P50583 147 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 COPAP53621 1224 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 LMAN2Q12907 356 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 FRG1Q14331 258 aaKnown RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 KRT72Q14CN4 511 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 LCA5Q86VQ0 697 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 EID2BQ96D98 161 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 FBRSL1Q9HCM7 1045 aaKnown RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 LSM7Q9UK45 103 aaKnown RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 TBC1D30Q9Y2I9 924 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 A0A087X1B8 175 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 C1orf232A0A0U1RR37 186 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 NPEPPSL1A6NEC2 478 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 GRXCR1A8MXD5 290 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 MATN2O00339 956 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 IPO13O94829 963 aaKnown RBP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 IRS1P35568 1242 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 SOX11P35716 441 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 AGTR2P50052 363 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 STC1P52823 247 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 PKNOX1P55347 436 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 KLF10Q13118 480 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC7-221ENST00000477203 RFLNAQ6ZTI6 216 aa13.34□□□□□ -0.27
HDAC7-221ENST00000477203 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms