RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ARSFP54793 590 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 GRM3Q14832 879 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 ACAP2Q15057 778 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 ZNF181Q2M3W8 571 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 C6orf141Q5SZD1 244 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 TAF2Q6P1X5 1199 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 C8orf59Q8N0T1 100 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-205ENST00000475993 LGI2Q8N0V4 545 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 BEST2Q8NFU1 509 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 SLC22A8Q8TCC7 542 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 SLC30A3Q99726 388 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 CEP41Q9BYV8 373 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 DSN1Q9H410 356 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 MRM3Q9HC36 420 aaKnown RBP10.54□□□□□ -0.72
ABCF1-205ENST00000475993 TNFRSF12AQ9NP84 129 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 NGRNQ9NPE2 291 aaKnown RBP10.54□□□□□ -0.72
ABCF1-205ENST00000475993 DCAF16Q9NXF7 216 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 GABBR1Q9UBS5 961 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 PCDHGA10Q9Y5H3 936 aa10.54□□□□□ -0.72
ABCF1-205ENST00000475993 MN1Q10571 1320 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-205ENST00000475993 HACD1B0YJ81 288 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 K7ERI5 159 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 M0QYV0 167 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 INPP4BO15327 924 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 KCNQ2O43526 872 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GRAP2O75791 330 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PTTG1O95997 202 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 UMPSP11172 480 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SPNP16150 400 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ACVR2AP27037 513 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PSMB4P28070 264 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CRKP46108 304 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ALDH3A2P51648 485 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PIGFQ07326 219 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CDK10Q15131 360 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DUOXA2Q1HG44 320 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SPATS1Q496A3 300 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 TMEM236Q5W0B7 351 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 FAM183BPQ6ZVS7 135 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 FAM35AQ86V20 835 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GATAD2AQ86YP4 633 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CHDHQ8NE62 594 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PIK3R3Q92569 461 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SLC39A13Q96H72 371 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ZDHHC15Q96MV8 337 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DACH2Q96NX9 599 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GPR78Q96P69 363 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 C17orf62Q9BQA9 187 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 TIGARQ9NQ88 270 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ABCB10Q9NRK6 738 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PLSCR3Q9NRY6 295 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GGA3Q9NZ52 723 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SEPT9Q9UHD8 586 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ANAPC2Q9UJX6 822 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ZNF99A8MXY4 864 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 NFIBO00712 420 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 RAD51BO15315 384 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SEC24AO95486 1093 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DLGAP3O95886 979 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PAHP00439 452 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CHRNA1P02708 482 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ALPLP05186 524 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 HNRNPLP14866 589 aaKnown RBP eCLIP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GPX3P22352 226 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SLC6A2P23975 617 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 HTR2BP41595 481 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 RAP1GAPP47736 663 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CLCNKBP51801 687 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PGGT1BP53609 377 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DNAJB13P59910 316 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 YBX1P67809 324 aaKnown RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ORC1Q13415 861 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DPYSL2Q16555 572 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PYCR3Q53H96 274 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 STEAP3Q658P3 488 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 NCBP2-AS2Q69YL0 99 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 DESI1Q6ICB0 168 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 PRSS48Q7RTY5 328 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 NAT16Q8N8M0 369 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 POC5Q8NA72 575 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 OR6F1Q8NGZ6 308 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.53□□□□□ -0.721e-8■■■■■ 68.8
ABCF1-205ENST00000475993 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 C1QTNF7Q9BXJ2 289 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 MUC13Q9H3R2 512 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 IL1RL2Q9HB29 575 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 GTF2IRD1Q9UHL9 959 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
ABCF1-205ENST00000475993 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
ABCF1-205ENST00000475993 FIS1Q9Y3D6 152 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms