RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GABRB2P47870 512 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SMIM11AP58511 58 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 C2orf80Q0P641 193 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TSC22D1Q15714 1073 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 C12orf56Q8IXR9 622 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 RP9Q8TA86 221 aaKnown RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 SLC9A6Q92581 669 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TMEM51Q9NW97 253 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 DISP2A7MBM2 1401 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 FOXO6A8MYZ6 492 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 MTHFRP42898 656 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NR1D2Q14995 579 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PCBP1Q15365 356 aaKnown RBP eCLIP10.93□□□□□ -0.66
VAPB-204ENST00000475243 LRRC73Q5JTD7 316 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 HECTD2Q5U5R9 776 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 TTC23Q5W5X9 447 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ZNF730Q6ZMV8 503 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 BBS12Q6ZW61 710 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 IKBIPQ70UQ0 350 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ARCQ7LC44 396 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SLC34A3Q8N130 599 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 AADATQ8N5Z0 425 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 TOP6BLQ8N6T0 577 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 JSRP1Q96MG2 331 aaPredicted RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 FGFBP2Q9BYJ0 223 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NOL11Q9H8H0 719 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 SSR3Q9UNL2 185 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 H3BM21 787 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SAGP10523 405 aaPredicted RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 CAMK1Q14012 370 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PTPN20Q4JDL3 420 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 TIGD2Q4W5G0 525 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PMM1Q92871 262 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NXNL1Q96CM4 212 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 KCTD15Q96SI1 283 aaPredicted RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 RASSF1Q9NS23 344 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 H3BNH8 94 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SLC5A3P53794 718 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 METTL3Q86U44 580 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PMEPA1Q969W9 287 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 HSD17B14Q9BPX1 270 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 TPK1Q9H3S4 243 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 CHRAC1Q9NRG0 131 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PADI3Q9ULW8 664 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 GLYATL1P3A0A0U1RQE8 302 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 LRRC10BA6NIK2 292 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 FPGTO14772 594 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 RBMXL2O75526 392 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 SNUPNO95149 360 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 APODP05090 189 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PPM1AP35813 382 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SEMG2Q02383 582 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 RNASEH2BQ5TBB1 312 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 ANXA8L1Q5VT79 327 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 CLEC6AQ6EIG7 209 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 IQCF2Q8IXL9 164 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 AMER2Q8N7J2 671 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ZHX1-C8orf76Q96EF9 292 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 BTN2A3PQ96KV6 586 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 GLOD4Q9HC38 313 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NDRG2Q9UN36 371 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 C9JVG2 144 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 MAT2AP31153 395 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 NOGQ13253 232 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 BRMS1LQ5PSV4 323 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 RBM44Q6ZP01 1051 aaKnown RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 CUZD1Q86UP6 607 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SPATA22Q8NHS9 363 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 APOLD1Q96LR9 279 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 CSPG4P5Q96PW8 444 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 PTPN18Q99952 460 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SEC14L3Q9UDX4 400 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ZFP37Q9Y6Q3 630 aaPredicted RBP10.93□□□□□ -0.66
VAPB-204ENST00000475243 TPST2O60704 377 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ATG13O75143 517 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 GSTT1P30711 240 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ICAM3P32942 547 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 UGT1A5P35504 534 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 MPP1Q00013 466 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SULT2A1Q06520 285 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 LGALS3BPQ08380 585 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 POTEHQ6S545 545 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SPPL2CQ8IUH8 684 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 SLC9A9Q8IVB4 645 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NRSN1Q8IZ57 195 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 MCRS1Q96EZ8 462 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ANKRD27Q96NW4 1050 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 ZNF304Q9HCX3 659 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 NEUROD4Q9HD90 331 aa10.93□□□□□ -0.66
VAPB-204ENST00000475243 MFSD11O43934 449 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms