RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MTA2O94776 668 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 ECEL1O95672 775 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 JCHAINP01591 159 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 ZFXP17010 805 aaPredicted RBP20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 SLC5A2P31639 672 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 IFI35P80217 286 aaPredicted RBP20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 SLC10A2Q12908 348 aaPredicted RBP20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 LRP8Q14114 963 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 IHHQ14623 411 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 ODF2Q5BJF6 829 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 LRRC38Q5VT99 294 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 GALNT13Q8IUC8 556 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 VSTM4Q8IW00 320 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 CCHCR1Q8TD31 782 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 RIOK2Q9BVS4 552 aaKnown RBP20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 PISDQ9UG56 409 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 A0A0U1RQS6 177 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 C1orf232A0A0U1RR37 186 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 APOL1O14791 398 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 MFAP3LO75121 409 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 CLDN7O95471 211 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 ALDH4A1P30038 563 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 ACTR1BP42025 376 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 CD86P42081 329 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 ACTR1AP61163 376 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 CLN3Q13286 438 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PDK1Q15118 436 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PYCR3Q53H96 274 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 TAF1BQ53T94 588 aaPredicted RBP20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PHF19Q5T6S3 580 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 CCDC81Q6ZN84 652 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 SLITRK4Q8IW52 837 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PLD5Q8N7P1 536 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PTCD2Q8WV60 388 aaKnown RBP20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 COX14Q96I36 57 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 SMIM14Q96QK8 99 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 MLPHQ9BV36 600 aaPredicted RBP20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 BRD8Q9H0E9 1235 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 TSPY26PQ9H489 355 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 PKD2L2Q9NZM6 624 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 VPS18Q9P253 973 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 TMEM98Q9Y2Y6 226 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 HEY1Q9Y5J3 304 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 ATMQ13315 3056 aa20.24■□□□□ 0.83
PDLIM4-206ENST00000474421 ANKRD66B4E2M5 251 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 K7ENP7 123 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 KCNK1O00180 336 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 PPP1R12AO14974 1030 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 B4GAT1O43505 415 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 HGFP14210 728 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 SLC1A1P43005 524 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 OR1D5P58170 312 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 AMZ1Q400G9 498 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 SLC9A4Q6AI14 798 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 INO80CQ6PI98 192 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 CNGA4Q8IV77 575 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 NAGSQ8N159 534 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 LRRN4Q8WUT4 740 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 CCNL2Q96S94 520 aaPredicted RBP20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 CHP1Q99653 195 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 DPYSL5Q9BPU6 564 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 B3GNT4Q9C0J1 378 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 INTUQ9ULD6 942 aa20.23■□□□□ 0.83
PDLIM4-206ENST00000474421 ASMTLO95671 621 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 MMP2P08253 660 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 SPINT3P49223 89 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 AP1B1Q10567 949 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 QPCTQ16769 361 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 MARK2Q7KZI7 788 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 TRIM74Q86UV6 250 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 AGAP2Q99490 1192 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 FAM83DQ9H4H8 585 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 RMI1Q9H9A7 625 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 SPTLC3Q9NUV7 552 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 DDX56Q9NY93 547 aaKnown RBP20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 ST14Q9Y5Y6 855 aa20.22■□□□□ 0.83
PDLIM4-206ENST00000474421 C3orf70A6NLC5 250 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 INPP4BO15327 924 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 KRT1P04264 644 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 ZBTB17Q13105 803 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 SQSTM1Q13501 440 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 TRA2AQ13595 282 aaKnown RBP eCLIP20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 HENMT1Q5T8I9 393 aaKnown RBP20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 TMEM164Q5U3C3 297 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 BZW1Q7L1Q6 419 aaKnown RBP20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 NT5DC3Q86UY8 548 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 RHOT1Q8IXI2 618 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 CNTD1Q8N815 330 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 SEMA6CQ9H3T2 930 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 RDH14Q9HBH5 336 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 RAD18Q9NS91 495 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 SEPT10Q9P0V9 454 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 ZNHIT2Q9UHR6 403 aa20.21■□□□□ 0.83
PDLIM4-206ENST00000474421 PRB1P04280 392 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 LIPCP11150 499 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 CD82P27701 267 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 CD1CP29017 333 aa20.2■□□□□ 0.82
PDLIM4-206ENST00000474421 FASLGP48023 281 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms