RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PYROXD1Q8WU10 500 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 KLK6Q92876 244 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PBXIP1Q96AQ6 731 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF669Q96BR6 464 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 BIRC7Q96CA5 298 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CERS2Q96G23 380 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 BIRC8Q96P09 236 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PLEKHG4BQ96PX9 1271 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 TMEM109Q9BVC6 243 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 RIOK2Q9BVS4 552 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 BOCQ9BWV1 1114 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 LGR4Q9BXB1 951 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 FAM96AQ9H5X1 160 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 SGK2Q9HBY8 427 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA6AQ9NYA3 693 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GALPQ9UBC7 116 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CD84Q9UIB8 345 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CYP8B1Q9UNU6 501 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 FNDC3AQ9Y2H6 1198 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 MAD1L1Q9Y6D9 718 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PLXNA2O75051 1894 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 KMT2EQ8IZD2 1858 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF106Q9H2Y7 1883 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 DOCK9Q9BZ29 2069 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 AXIN1O15169 862 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 OR1I1O60431 355 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 RNASEH1O60930 286 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SRP72O76094 671 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ACSL3O95573 720 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CRTAMO95727 393 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SP9P0CG40 484 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CA4P22748 312 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 TEAD1P28347 426 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 GMPRP36959 345 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SLC1A2P43004 574 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 MAGEA12P43365 314 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 EPHB1P54762 984 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SARNPP82979 210 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 MPP1Q00013 466 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF844Q08AG5 666 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ELP6Q0PNE2 266 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CTBP1Q13363 440 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 NFATC2Q13469 925 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 IRF4Q15306 451 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 DBN1Q16643 649 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 HSP90AA5PQ58FG0 334 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ZNF648Q5T619 568 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 KIAA0895LQ68EN5 471 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 MARK2Q7KZI7 788 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ABI3BPQ7Z7G0 1075 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 C11orf96Q7Z7L8 435 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CCDC25Q86WR0 208 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CILP2Q8IUL8 1156 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CCNJLQ8IV13 435 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 RASGRP3Q8IV61 690 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 NRSN1Q8IZ57 195 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 C2CD4AQ8NCU7 369 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 PPHLN1Q8NEY8 458 aaKnown RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 OR14C36Q8NHC7 312 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 LKAAEAR1Q8TD35 194 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SLC44A1Q8WWI5 657 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 DNASE2BQ8WZ79 361 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 LPGAT1Q92604 370 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 CFAP36Q96G28 342 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SCARF2Q96GP6 870 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 PPP1R16AQ96I34 528 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ZIM3Q96PE6 472 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 NAT9Q9BTE0 207 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 TEX101Q9BY14 249 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 SLC17A9Q9BYT1 436 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 GPR63Q9BZJ6 419 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 DUSP15Q9H1R2 295 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 HAUS2Q9NVX0 235 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 FBXO4Q9UKT5 387 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-207ENST00000471342 GPR179Q6PRD1 2367 aa9.83□□□□□ -0.84
SF3A1-207ENST00000471342 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 C2orf81A6NN90 581 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 H0Y8X5 98 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 NDC80O14777 642 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 HAUS5O94927 633 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SEMA4FO95754 770 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 POLBP06746 335 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CYP2A6P11509 494 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 MC4RP32245 332 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SPAM1P38567 509 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 PTGER3P43115 390 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 ABCG1P45844 678 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 LEPRP48357 1165 aaKnown RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CLDN2P57739 230 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SEPT6Q14141 434 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CASP8Q14790 479 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 RASA2Q15283 850 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 LONRF1Q17RB8 773 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 CTSL3PQ5NE16 218 aa9.82□□□□□ -0.84
SF3A1-207ENST00000471342 PEAR1Q5VY43 1037 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-207ENST00000471342 NEPROQ6NW34 567 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms