RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DESI2Q9BSY9 194 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 BOCQ9BWV1 1114 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 CEP41Q9BYV8 373 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 SLC13A1Q9BZW2 595 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 USP29Q9HBJ7 922 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 GLOD4Q9HC38 313 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 APOBEC3BQ9UH17 382 aaKnown RBP11.13□□□□□ -0.63
COL4A6-205ENST00000468338 DNPEPQ9ULA0 475 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 TTLL3Q9Y4R7 772 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 MYLKQ15746 1914 aa11.13□□□□□ -0.63
COL4A6-205ENST00000468338 APC2O95996 2303 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 AKAP13Q12802 2813 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 A0A0U1RQS6 177 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 HACD1B0YJ81 288 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 C1QTNF9BB2RNN3 333 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 CACNB4O00305 520 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 FFAR2O15552 330 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 RASGRP1O95267 797 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 ZIC2O95409 532 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 PROS1P07225 676 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 C1QTNF9P0C862 333 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 ALPPL2P10696 532 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 PYGMP11217 842 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 MYCLP1P12525 358 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 KELP23276 732 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 RWDD2BP57060 319 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 SRP54P61011 504 aaKnown RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 NOMO1Q15155 1222 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 FAXCQ5TGI0 409 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 DHRS13Q6UX07 377 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 B4GALNT4Q76KP1 1039 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 TMPRSS12Q86WS5 348 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 NRSN1Q8IZ57 195 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 GALNT15Q8N3T1 639 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 OR56A4Q8NGH8 313 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 LMX1AQ8TE12 382 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 OR1E3Q8WZA6 343 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 TSACCQ96A04 125 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 EID2BQ96D98 161 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 QKIQ96PU8 341 aaKnown RBP eCLIP11.12□□□□□ -0.635e-7■■■■□ 24
COL4A6-205ENST00000468338 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL4A6-205ENST00000468338 HEMGNQ9BXL5 484 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 ABCG8Q9H221 673 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 WDR26Q9H7D7 661 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 FGF22Q9HCT0 170 aa11.12□□□□□ -0.63
COL4A6-205ENST00000468338 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 FRYQ5TBA9 3013 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 LOC285095A0A1B0GVY8 99 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 RGSL1A5PLK6 1076 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 MIF4GDA9UHW6 222 aaKnown RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 PDE2AO00408 941 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 YY2O15391 372 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 CLDN7O95471 211 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 MT-CYBP00156 380 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 EPOP01588 193 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 FUCA1P04066 466 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 GP1BAP07359 652 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 EPHB1P54762 984 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 CDK3Q00526 305 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 E2F1Q01094 437 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 RELBQ01201 579 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 C1orf61Q13536 156 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 HS1BP3Q53T59 392 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 KDELC1Q6UW63 502 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ADAMTSL4Q6UY14 1074 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ZNF662Q6ZS27 426 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 HID1Q8IV36 788 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 CCDC50Q8IVM0 306 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 SYCE1Q8N0S2 351 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 LPCAT1Q8NF37 534 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 SPATA22Q8NHS9 363 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ACTL9Q8TC94 416 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 SCAMP4Q969E2 229 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 PDXPQ96GD0 296 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 SCARF2Q96GP6 870 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 HES6Q96HZ4 224 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 WDR24Q96S15 920 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-205ENST00000468338 MAGEE1Q9HCI5 957 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 PHPT1Q9NRX4 125 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms