RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CLPPQ16740 277 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 TIGD7Q6NT04 549 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 ALKBH5Q6P6C2 394 aaKnown RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 DTX1Q86Y01 620 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 GALNT13Q8IUC8 556 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 ZNF564Q8TBZ8 553 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 FAM71BQ8TC56 605 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 LRRN4Q8WUT4 740 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 MAML1Q92585 1016 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 FUCA2Q9BTY2 467 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 RIOK2Q9BVS4 552 aaKnown RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 RBM22Q9NW64 420 aaKnown RBP eCLIP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 TRBV23OR9-2A0A075B6M9 112 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 IGHV1OR21-1A0A087WYE8 117 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 MATN3O15232 486 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ASMTLO95671 621 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 CSF2RBP32927 897 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ARSEP51690 589 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 TPM4P67936 248 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ZBED6P86452 979 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 PAFAH1B3Q15102 231 aaKnown RBP20.94■□□□□ 0.94
COL9A3-207ENST00000467819 IFI16Q16666 785 aaKnown RBP20.94■□□□□ 0.94
COL9A3-207ENST00000467819 PYCR3Q53H96 274 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ALG1LQ6GMV1 187 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ZNF765Q7L2R6 523 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 PRICKLE2Q7Z3G6 844 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 LUZP1Q86V48 1076 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ZNF761Q86XN6 746 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-207ENST00000467819 ZSCAN1Q8NBB4 408 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 LPCAT1Q8NF37 534 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 PMEPA1Q969W9 287 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 TDRD1Q9BXT4 1180 aaKnown RBP20.94■□□□□ 0.94
COL9A3-207ENST00000467819 CBX8Q9HC52 389 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 KCNK4Q9NYG8 393 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 TMEM9Q9P0T7 183 aa20.94■□□□□ 0.94
COL9A3-207ENST00000467819 STMND1H3BQB6 276 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 CLDN7O95471 211 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 PYGLP06737 847 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 FGF3P11487 239 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-207ENST00000467819 UBASH3AP57075 661 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 CYP4F2P78329 520 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 TRA2AQ13595 282 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-207ENST00000467819 ANKRD20A8PQ5CZ79 823 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 KCTD6Q8NC69 237 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 OR4D9Q8NGE8 314 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 EXD1Q8NHP7 514 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 TAAR9Q96RI9 348 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 DNPEPQ9ULA0 475 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 PRKAB1Q9Y478 270 aa20.93■□□□□ 0.94
COL9A3-207ENST00000467819 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 PRLP01236 227 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ATP1A1P05023 1023 aaKnown RBP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ITGB2P05107 769 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 HLA-DQB2P05538 268 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 CA4P22748 312 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 CCNCP24863 283 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 CSTF2P33240 577 aaKnown RBP eCLIP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 NIPAL4Q0D2K0 466 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 NRSN1Q8IZ57 195 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 AGBL5Q8NDL9 886 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ARRDC2Q8TBH0 407 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 SLC37A2Q8TED4 501 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ART4Q93070 314 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 COX14Q96I36 57 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ZNF670Q9BS34 389 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 FAM117AQ9C073 453 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 B3GNT4Q9C0J1 378 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 PCDH9Q9HC56 1237 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 HAUS2Q9NVX0 235 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 CTTNBP2NLQ9P2B4 639 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 ZNHIT2Q9UHR6 403 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 CAPN11Q9UMQ6 739 aa20.92■□□□□ 0.94
COL9A3-207ENST00000467819 PCYT1BQ9Y5K3 369 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 HEMK1Q9Y5R4 338 aaPredicted RBP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 OAS3Q9Y6K5 1087 aaKnown RBP20.92■□□□□ 0.94
COL9A3-207ENST00000467819 EML2O95834 649 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 FAM87AP0C7U9 286 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 THRAP10827 490 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 CES1P23141 567 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 ARSDP51689 593 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 TAS2R40P59535 323 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 GBE1Q04446 702 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 CHST15Q7LFX5 561 aaPredicted RBP20.91■□□□□ 0.94
COL9A3-207ENST00000467819 NLRP8Q86W28 1048 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 HTR3CQ8WXA8 447 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 AHCYL2Q96HN2 611 aaKnown RBP20.91■□□□□ 0.94
COL9A3-207ENST00000467819 TSGA13Q96PP4 275 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 SLC38A3Q99624 504 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 AMACRQ9UHK6 382 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 LUC7L2Q9Y383 392 aaKnown RBP20.91■□□□□ 0.94
COL9A3-207ENST00000467819 B3GALT1Q9Y5Z6 326 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 BSNQ9UPA5 3926 aa20.91■□□□□ 0.94
COL9A3-207ENST00000467819 C1orf232A0A0U1RR37 186 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 SYCE3A1L190 88 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 PROSCO94903 275 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 GYPCP04921 128 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 FASLGP48023 281 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 ATP1A2P50993 1020 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 GPLD1P80108 840 aa20.9■□□□□ 0.94
COL9A3-207ENST00000467819 SQSTM1Q13501 440 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms