RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 AP1G1O43747 822 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 MMP20O60882 483 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SKAP2O75563 359 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PIAS1O75925 651 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PCDH8O95206 1070 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PAPSS2O95340 614 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 APBB3O95704 486 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 C1SP09871 688 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 ARNTP27540 789 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 HSD17B3P37058 310 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 ETV3P41162 512 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CCR3P51677 355 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CLCN5P51795 746 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SLC29A2Q14542 456 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SKIDA1Q1XH10 827 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 STEAP4Q687X5 459 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 TRMT10BQ6PF06 316 aaKnown RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 TRMT10CQ7L0Y3 403 aaKnown RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 NLRP9Q7RTR0 991 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PEX13Q92968 403 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 TBATAQ96M53 351 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 ITM2CQ9NQX7 267 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 NLE1Q9NVX2 485 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CYP8B1Q9UNU6 501 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 FAM169AQ9Y6X4 670 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 OR51F1A6NGY5 319 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 K7ESF4 209 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SLC7A4O43246 635 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 VAPBO95292 243 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 C6P13671 934 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 BPIP17213 487 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 HADHAP40939 763 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 STC1P52823 247 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 ACVR1Q04771 509 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 SPANXN3Q5MJ09 141 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 RFLNAQ6ZTI6 216 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 Q6ZVL8 140 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 HSD11B1LQ7Z5J1 315 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CBARPQ8N350 705 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 MREGQ8N565 214 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CAMKK1Q8N5S9 505 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 FRMD1Q8N878 549 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CXorf40AQ8TE69 158 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 RLN3Q8WXF3 142 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 HDAC10Q969S8 669 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CDKN2AIPNLQ96HQ2 116 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 BTBD1Q9H0C5 482 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PPANQ9NQ55 473 aaKnown RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 RABL2AQ9UBK7 228 aaPredicted RBP6.84□□□□□ -1.31
SCAF4-204ENST00000467731 CD84Q9UIB8 345 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 FKBPLQ9UIM3 349 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 RIMKLBQ9ULI2 386 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 TBC1D3DA0A087WVF3 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3IA0A087WXS9 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3EA0A087X179 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3KA0A087X1G2 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3FA6NER0 549 aaPredicted RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3LB9A6J9 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 PDLIM1O00151 329 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 PSMD11O00231 422 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 GPR39O43194 453 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TSPAN6O43657 245 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3HP0C7X1 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 GM2AP17900 193 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 PAMP19021 973 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 ARCN1P48444 511 aaKnown RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 SPINT3P49223 89 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 PRAMEP78395 509 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 ROR2Q01974 943 aaKnown RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 ACOX1Q15067 660 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 KBTBD12Q3ZCT8 623 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM52BQ4KMG9 183 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 THEMIS2Q5TEJ8 643 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3GQ6DHY5 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 KIAA0930Q6ICG6 404 aaPredicted RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3CQ6IPX1 549 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TLDC1Q6P9B6 456 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TSSK4Q6SA08 328 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TBC1D3Q8IZP1 549 aaPredicted RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM105Q8N8V8 129 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 GPR26Q8NDV2 337 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 FBF1Q8TES7 1133 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 CERS2Q96G23 380 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 EPHX3Q9H6B9 360 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 C20orf96Q9NUD7 363 aaPredicted RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 PKD2L2Q9NZM6 624 aa6.84□□□□□ -1.32
SCAF4-204ENST00000467731 ZFR2Q9UPR6 939 aaKnown RBP6.84□□□□□ -1.32
SCAF4-204ENST00000467731 IGLON5A6NGN9 336 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 H7C0S8 307 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF217O75362 1048 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 SPAG6O75602 509 aa6.83□□□□□ -1.32
SCAF4-204ENST00000467731 RPP40O75818 363 aaKnown RBP6.83□□□□□ -1.32
SCAF4-204ENST00000467731 RECQL5O94762 991 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms