RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ZFXP17010 805 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-206ENST00000466591 KDELR1P24390 212 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 CSTF2P33240 577 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL7A1-206ENST00000466591 NOP2P46087 812 aaKnown RBP17.42■□□□□ 0.38
COL7A1-206ENST00000466591 GPR3P46089 330 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 ARSEP51690 589 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 STC1P52823 247 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 PTSQ03393 145 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 LRP8Q14114 963 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 CLPPQ16740 277 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-206ENST00000466591 KIAA1614Q5VZ46 1190 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 RFLNAQ6ZTI6 216 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 CHST15Q7LFX5 561 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-206ENST00000466591 NRROSQ86YC3 692 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 CPNE8Q86YQ8 564 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 SLC35G2Q8TBE7 412 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 USP7Q93009 1102 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 FATE1Q969F0 183 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 SMIM14Q96QK8 99 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 SEMA6CQ9H3T2 930 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 PRAMEF33A0A0G2JMD5 474 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 SSU72P8A0A1W2PR75 194 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 K7ENP7 123 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 NVLO15381 856 aaKnown RBP17.41■□□□□ 0.38
COL7A1-206ENST00000466591 FZD6O60353 706 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 SNX2O60749 519 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 PRAMEF10O60809 474 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 SLC2A4P14672 509 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 HNRNPH3P31942 346 aaKnown RBP17.41■□□□□ 0.38
COL7A1-206ENST00000466591 DYNLT1P63172 113 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 B4GALNT1Q00973 533 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 ZFP36L1Q07352 338 aaKnown RBP17.41■□□□□ 0.38
COL7A1-206ENST00000466591 GALNT3Q14435 633 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 PDK1Q15118 436 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 PCSK7Q16549 785 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 INO80CQ6PI98 192 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-206ENST00000466591 KDELC2Q7Z4H8 507 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 RHOT2Q8IXI1 618 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 RCBTB1Q8NDN9 531 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 OR10G6Q8NH81 332 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 RAPGEF5Q92565 580 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 CCDC74BQ96LY2 380 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 RNF157Q96PX1 679 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 TSPY26PQ9H489 355 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 FAM83DQ9H4H8 585 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 DTLQ9NZJ0 730 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 IGSF10Q6WRI0 2623 aa17.41■□□□□ 0.38
COL7A1-206ENST00000466591 B4GAT1O43505 415 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 SPOPO43791 374 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 DUX1O43812 170 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
COL7A1-206ENST00000466591 CD82P27701 267 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 ARHGAP25P42331 645 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 MAPK9P45984 424 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 SKOR1P84550 965 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 NKAIN2Q5VXU1 208 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 ALG1LQ6GMV1 187 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 FAM129CQ86XR2 697 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 PHYKPLQ8IUZ5 450 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 NAGSQ8N159 534 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 CBARPQ8N350 705 aaPredicted RBP17.4■□□□□ 0.38
COL7A1-206ENST00000466591 PQLC3Q8N755 202 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 WBP1Q96G27 269 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 AGAP3Q96P47 875 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 AGAP2Q99490 1192 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 DNAJC7Q99615 494 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 DPYSL5Q9BPU6 564 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 NUDT22Q9BRQ3 303 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 SPATA16Q9BXB7 569 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 CEP41Q9BYV8 373 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 ABHD10Q9NUJ1 306 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 SPTLC3Q9NUV7 552 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 PRKAB1Q9Y478 270 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 PLEKHM1Q9Y4G2 1056 aa17.4■□□□□ 0.38
COL7A1-206ENST00000466591 COL27A1Q8IZC6 1860 aaPredicted RBP17.39■□□□□ 0.38
COL7A1-206ENST00000466591 ANKRD66B4E2M5 251 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 HGSO14964 777 aaPredicted RBP17.39■□□□□ 0.37
COL7A1-206ENST00000466591 MTA2O94776 668 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 FUCA1P04066 466 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 ACP5P13686 325 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 SPINT3P49223 89 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 ATP1A2P50993 1020 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 GPLD1P80108 840 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 PPIDQ08752 370 aaKnown RBP17.39■□□□□ 0.37
COL7A1-206ENST00000466591 NIPAL4Q0D2K0 466 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 LY6DQ14210 128 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 TGIF1Q15583 401 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 PYCR3Q53H96 274 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 ZNF569Q5MCW4 686 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 SNAP47Q5SQN1 464 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 BZW1Q7L1Q6 419 aaKnown RBP17.39■□□□□ 0.37
COL7A1-206ENST00000466591 ZNF438Q7Z4V0 828 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 NT5DC3Q86UY8 548 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 NLRP8Q86W28 1048 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 SLITRK4Q8IW52 837 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 RAVER1Q8IY67 606 aaKnown RBP17.39■□□□□ 0.37
COL7A1-206ENST00000466591 ZNF843Q8N446 348 aa17.39■□□□□ 0.37
COL7A1-206ENST00000466591 AGBL5Q8NDL9 886 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms