RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 FAM13CQ8NE31 585 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TMIEQ8NEW7 156 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 OR2A12Q8NGT7 310 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 RDH11Q8TC12 318 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 GRIN3AQ8TCU5 1115 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TFB1MQ8WVM0 346 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 NELL1Q92832 810 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 FATE1Q969F0 183 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TSNARE1Q96NA8 513 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 OLFM3Q96PB7 478 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TUBGCP5Q96RT8 1024 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SRPK1Q96SB4 655 aaKnown RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 SERPINI1Q99574 410 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 ATP13A3Q9H7F0 1226 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 PDFQ9HBH1 243 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 SGK2Q9HBY8 427 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 POLR3BQ9NW08 1133 aaPredicted RBP10.03□□□□□ -0.8
PMF1-204ENST00000466489 FBXL12Q9NXK8 326 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TRHDEQ9UKU6 1024 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 FZD4Q9ULV1 537 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 CYP8B1Q9UNU6 501 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 MFHAS1Q9Y4C4 1052 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 TTLL3Q9Y4R7 772 aa10.03□□□□□ -0.8
PMF1-204ENST00000466489 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 A0A1W2PQ67 120 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 LRRC72A6NJI9 287 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 ENO4A6NNW6 628 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 MATN3O15232 486 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 SLC7A4O43246 635 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 VAV1P15498 845 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 XPAP23025 273 aaPredicted RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 CD6P30203 668 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 CCNFP41002 786 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 ELK3P41970 407 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 DPP6P42658 865 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 PTDSS1P48651 473 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 CSNK1DP48730 415 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 TPMTP51580 245 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 KPNA2P52292 529 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 TMPRSS15P98073 1019 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 ITKQ08881 620 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 TCF15Q12870 199 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 DYNC1I2Q13409 638 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 LLGL1Q15334 1064 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 SLC1A5Q15758 541 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 UGP2Q16851 508 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 MYLK3Q32MK0 819 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 GRTP1Q5TC63 336 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 ARHGAP36Q6ZRI8 547 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 LPCAT2Q7L5N7 544 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 CTAGE3PQ8IX95 158 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 SKA1Q96BD8 255 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 SLC7A6OSQ96CW6 309 aaPredicted RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 SPDL1Q96EA4 605 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 PTCD3Q96EY7 689 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 PSKH2Q96QS6 385 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 POLR1EQ9GZS1 481 aaKnown RBP10.02□□□□□ -0.81
PMF1-204ENST00000466489 BTBD1Q9H0C5 482 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 PCED1AQ9H1Q7 454 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 MTG2Q9H4K7 406 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 SCUBE2Q9NQ36 999 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 ITM2CQ9NQX7 267 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 RALGAPA1Q6GYQ0 2036 aa10.02□□□□□ -0.81
PMF1-204ENST00000466489 FAM159BA6NKW6 160 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 MID1O15344 667 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 KCNN4O15554 427 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 LEFTY1O75610 366 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 TM7SF2O76062 418 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 MPOP05164 745 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 BPGMP07738 259 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 APRTP07741 180 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 COL6A2P12110 1019 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 CREB1P16220 341 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 PGAM1P18669 254 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ADRA1DP25100 572 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ITGB7P26010 798 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SSTR1P30872 391 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SERPINB5P36952 375 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 P2RY2P41231 377 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 HSPA13P48723 471 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SCNN1BP51168 640 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 POLR2LP62875 67 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 RPL6Q02878 288 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 BCL2L1Q07817 233 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 DMWDQ09019 674 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SLC10A7Q0GE19 358 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SEMA5AQ13591 1074 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
PMF1-204ENST00000466489 CYTH1Q15438 398 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ZNF805Q5CZA5 627 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 CFAP157Q5JU67 520 aa10.01□□□□□ -0.81
PMF1-204ENST00000466489 SPANXN3Q5MJ09 141 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms