RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 STN1Q9H668 368 aaKnown RBP9.37□□□□□ -0.91
APP-213ENST00000464867 MAGEF1Q9HAY2 307 aa9.37□□□□□ -0.91
APP-213ENST00000464867 TRNAU1APQ9NX07 287 aaKnown RBP9.37□□□□□ -0.91
APP-213ENST00000464867 KLHL3Q9UH77 587 aa9.37□□□□□ -0.91
APP-213ENST00000464867 HPCAL4Q9UM19 191 aa9.37□□□□□ -0.91
APP-213ENST00000464867 MAP1AP78559 2803 aaPredicted RBP9.37□□□□□ -0.91
APP-213ENST00000464867 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.36□□□□□ -0.91
APP-213ENST00000464867 A6NL46 340 aa9.36□□□□□ -0.91
APP-213ENST00000464867 RASA4BC9J798 803 aa9.36□□□□□ -0.91
APP-213ENST00000464867 RASA4O43374 803 aa9.36□□□□□ -0.91
APP-213ENST00000464867 CEACAM4O75871 244 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ZNF28P17035 718 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ITIH2P19823 946 aa9.36□□□□□ -0.91
APP-213ENST00000464867 NR2F2P24468 414 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
APP-213ENST00000464867 ETFBP38117 255 aa9.36□□□□□ -0.91
APP-213ENST00000464867 GLRBP48167 497 aa9.36□□□□□ -0.91
APP-213ENST00000464867 LIG3P49916 1009 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ARF5P84085 180 aa9.36□□□□□ -0.91
APP-213ENST00000464867 EIF4EBP2Q13542 120 aaPredicted RBP9.36□□□□□ -0.91
APP-213ENST00000464867 CFAP58Q5T655 872 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ACBD5Q5T8D3 534 aaPredicted RBP9.36□□□□□ -0.91
APP-213ENST00000464867 CYB5D1Q6P9G0 228 aa9.36□□□□□ -0.91
APP-213ENST00000464867 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
APP-213ENST00000464867 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
APP-213ENST00000464867 FJX1Q86VR8 437 aa9.36□□□□□ -0.91
APP-213ENST00000464867 FMR1NBQ8N0W7 255 aaPredicted RBP9.36□□□□□ -0.91
APP-213ENST00000464867 NAGSQ8N159 534 aa9.36□□□□□ -0.91
APP-213ENST00000464867 CT55Q8WUE5 264 aa9.36□□□□□ -0.91
APP-213ENST00000464867 PATE1Q8WXA2 126 aa9.36□□□□□ -0.91
APP-213ENST00000464867 KCTD10Q9H3F6 313 aa9.36□□□□□ -0.91
APP-213ENST00000464867 WDR26Q9H7D7 661 aa9.36□□□□□ -0.91
APP-213ENST00000464867 ARHGEF38Q9NXL2 777 aa9.36□□□□□ -0.91
APP-213ENST00000464867 C5AR2Q9P296 337 aa9.36□□□□□ -0.91
APP-213ENST00000464867 USP25Q9UHP3 1055 aa9.36□□□□□ -0.91
APP-213ENST00000464867 SMC3Q9UQE7 1217 aa9.36□□□□□ -0.91
APP-213ENST00000464867 CXorf51AA0A1B0GTR3 108 aa9.35□□□□□ -0.91
APP-213ENST00000464867 F5H423 210 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 ZNF185O15231 689 aa9.35□□□□□ -0.91
APP-213ENST00000464867 TEX33O43247 280 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PRICKLE3O43900 615 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 ZMPSTE24O75844 475 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PLEKP08567 350 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
APP-213ENST00000464867 AK4P27144 223 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 HTR1EP28566 365 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PTPN4P29074 926 aa9.35□□□□□ -0.91
APP-213ENST00000464867 MAPK9P45984 424 aa9.35□□□□□ -0.91
APP-213ENST00000464867 GNPDA1P46926 289 aa9.35□□□□□ -0.91
APP-213ENST00000464867 NDST2P52849 883 aa9.35□□□□□ -0.91
APP-213ENST00000464867 RAC1P63000 192 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PITX1P78337 314 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 PDE1BQ01064 536 aa9.35□□□□□ -0.91
APP-213ENST00000464867 GNA12Q03113 381 aa9.35□□□□□ -0.91
APP-213ENST00000464867 STK4Q13043 487 aa9.35□□□□□ -0.91
APP-213ENST00000464867 ZNF761Q86XN6 746 aaPredicted RBP9.35□□□□□ -0.91
APP-213ENST00000464867 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PLXDC1Q8IUK5 500 aa9.35□□□□□ -0.91
APP-213ENST00000464867 DEFB106AQ8N104 65 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PLA2G15Q8NCC3 412 aa9.35□□□□□ -0.91
APP-213ENST00000464867 SH3KBP1Q96B97 665 aa9.35□□□□□ -0.91
APP-213ENST00000464867 RNF31Q96EP0 1072 aa9.35□□□□□ -0.91
APP-213ENST00000464867 ELMO2Q96JJ3 720 aa9.35□□□□□ -0.91
APP-213ENST00000464867 GDAP1L1Q96MZ0 367 aa9.35□□□□□ -0.91
APP-213ENST00000464867 OR6C1Q96RD1 312 aa9.35□□□□□ -0.91
APP-213ENST00000464867 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
APP-213ENST00000464867 NUDT9Q9BW91 350 aa9.35□□□□□ -0.91
APP-213ENST00000464867 TRIM8Q9BZR9 551 aa9.35□□□□□ -0.91
APP-213ENST00000464867 WDCPQ9H6R7 721 aa9.35□□□□□ -0.91
APP-213ENST00000464867 LHX9Q9NQ69 397 aa9.35□□□□□ -0.91
APP-213ENST00000464867 EXOC1Q9NV70 894 aa9.35□□□□□ -0.91
APP-213ENST00000464867 MPP6Q9NZW5 540 aa9.35□□□□□ -0.91
APP-213ENST00000464867 PCDHB4Q9Y5E5 795 aa9.35□□□□□ -0.91
APP-213ENST00000464867 DOCK4Q8N1I0 1966 aa9.35□□□□□ -0.91
APP-213ENST00000464867 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
APP-213ENST00000464867 THAP12O43422 761 aa9.34□□□□□ -0.91
APP-213ENST00000464867 DYRK3O43781 588 aa9.34□□□□□ -0.91
APP-213ENST00000464867 KLHL41O60662 606 aa9.34□□□□□ -0.91
APP-213ENST00000464867 TMEM63AO94886 807 aa9.34□□□□□ -0.91
APP-213ENST00000464867 IGSF6O95976 241 aa9.34□□□□□ -0.91
APP-213ENST00000464867 ALPPP05187 535 aa9.34□□□□□ -0.91
APP-213ENST00000464867 GLI1P08151 1106 aa9.34□□□□□ -0.91
APP-213ENST00000464867 CASP1P29466 404 aa9.34□□□□□ -0.91
APP-213ENST00000464867 ACTR1BP42025 376 aa9.34□□□□□ -0.91
APP-213ENST00000464867 FASLGP48023 281 aa9.34□□□□□ -0.91
APP-213ENST00000464867 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
APP-213ENST00000464867 RRADP55042 308 aa9.34□□□□□ -0.91
APP-213ENST00000464867 ACTR1AP61163 376 aa9.34□□□□□ -0.91
APP-213ENST00000464867 SLC39A14Q15043 492 aa9.34□□□□□ -0.91
APP-213ENST00000464867 PCSK7Q16549 785 aa9.34□□□□□ -0.91
APP-213ENST00000464867 MED25Q71SY5 747 aa9.34□□□□□ -0.91
APP-213ENST00000464867 HCAR2Q8TDS4 363 aa9.34□□□□□ -0.91
APP-213ENST00000464867 CHTF18Q8WVB6 975 aa9.34□□□□□ -0.91
APP-213ENST00000464867 TM9SF4Q92544 642 aa9.34□□□□□ -0.91
APP-213ENST00000464867 ARHGEF2Q92974 986 aaKnown RBP9.34□□□□□ -0.91
APP-213ENST00000464867 SMAD5Q99717 465 aaKnown RBP9.34□□□□□ -0.91
APP-213ENST00000464867 TKTL2Q9H0I9 626 aa9.34□□□□□ -0.91
APP-213ENST00000464867 EPB41L1Q9H4G0 881 aa9.34□□□□□ -0.91
APP-213ENST00000464867 PHPT1Q9NRX4 125 aaPredicted RBP9.34□□□□□ -0.91
APP-213ENST00000464867 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms