RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 C1orf232A0A0U1RR37 186 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 PPP6CO00743 305 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 SIX3O95343 332 aaPredicted RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 PENKP01210 267 aaPredicted RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 TRBC1P01850 177 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 CYBBP04839 570 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 CEBPBP17676 345 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 RALGPS1Q5JS13 557 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 OR2AP1Q8NGE2 309 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 CLPTM1LQ96KA5 538 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 MARK4Q96L34 752 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 LRRC3BQ96PB8 259 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 BBS2Q9BXC9 721 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 PRRC2BQ5JSZ5 2229 aaKnown RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 SPECC1L-ADORA2AF8WAN1 911 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ENTPD5O75356 428 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 ZNF77Q15935 545 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 LY6G5CQ5SRR4 150 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ZNF678Q5SXM1 525 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 FRMD7Q6ZUT3 714 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 IRF7Q92985 503 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ZNF707Q96C28 371 aaPredicted RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 CNDP1Q96KN2 507 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 TCF12Q99081 682 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ZFYVE1Q9HBF4 777 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 POPDC3Q9HBV1 291 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.75□□□□□ -0.37
VAPB-203ENST00000463370 TAS2R13Q9NYV9 303 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 HACD3Q9P035 362 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 HECAQ9UBI9 543 aaPredicted RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 PLA2G4CQ9UP65 541 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 SORCS3Q9UPU3 1222 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 OAS3Q9Y6K5 1087 aaKnown RBP12.75□□□□□ -0.37
VAPB-203ENST00000463370 DENND4CQ5VZ89 1909 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 ALPK3Q96L96 1907 aa12.75□□□□□ -0.37
VAPB-203ENST00000463370 LOC100653049A0A140TA62 436 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CCDC189A1A4V9 331 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 NPIPB15A6NHN6 443 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 CDC7O00311 574 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 SKAP2O75563 359 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 KRT34O76011 436 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 TSPAN12O95859 305 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 IGSF6O95976 241 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PKMP14618 531 aaKnown RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 TYRP14679 529 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PFKLP17858 780 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CPOXP36551 454 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 TTPAP49638 278 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CDH13P55290 713 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 TSNQ15631 228 aaKnown RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 UNC50Q53HI1 259 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 LRRC73Q5JTD7 316 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 C22orf39Q6P5X5 142 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 ADGRD2Q7Z7M1 963 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CUZD1Q86UP6 607 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PTGR2Q8N8N7 351 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 ST13P5Q8NFI4 369 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 ITFG1Q8TB96 612 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CCDC68Q9H2F9 335 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 ATP13A3Q9H7F0 1226 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 HS3ST2Q9Y278 367 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 SUPT7LO94864 414 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PRAMEF1O95521 474 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CA3P07451 260 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 HOXB8P17481 243 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 UGT1A6P19224 532 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 IMPDH1P20839 514 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 UGT1A1P22309 533 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 UGT1A4P22310 534 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 UGT1A3P35503 534 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 UGT1A5P35504 534 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CSNK1DP48730 415 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 C1QTNF8P60827 252 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 SLC25A3Q00325 362 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 ASPHQ12797 758 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 TBCCQ15814 346 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PFKFB4Q16877 469 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 ACCSLQ4AC99 568 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CLEC6AQ6EIG7 209 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 DPY19L3Q6ZPD9 716 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 Q6ZVU0 165 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 C12orf76Q8N812 135 aaPredicted RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 CHST14Q8NCH0 376 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 CD200R1Q8TD46 325 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 WDR60Q8WVS4 1066 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 SORCS1Q8WY21 1168 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms