RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CLEC18AA5D8T8 446 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 LRRC10BA6NIK2 292 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CTPS1P17812 591 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CDC20Q12834 499 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 DPYSL2Q16555 572 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 LRRC66Q68CR7 880 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 WDR74Q6RFH5 385 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CLEC18BQ6UXF7 455 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CEACAM20Q6UY09 585 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 MARK2Q7KZI7 788 aaKnown RBP20.61■□□□□ 0.89
CPSF7-209ENST00000463244 TRIM74Q86UV6 250 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 GALNT13Q8IUC8 556 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CLEC18CQ8NCF0 446 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 SCAMP4Q969E2 229 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 KIAA1143Q96AT1 154 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-209ENST00000463244 CTRCQ99895 268 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 EFHD1Q9BUP0 239 aa20.61■□□□□ 0.89
CPSF7-209ENST00000463244 ZNF71Q9NQZ8 489 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-209ENST00000463244 TRBV23OR9-2A0A075B6M9 112 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 H3BRJ5 948 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 MAP3K6O95382 1288 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 EML2O95834 649 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 PRKAR1AP10644 381 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 AMPD1P23109 780 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 MMP13P45452 471 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 PPM1FP49593 454 aaPredicted RBP20.6■□□□□ 0.89
CPSF7-209ENST00000463244 PTSQ03393 145 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 SNAP47Q5SQN1 464 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 TMCO3Q6UWJ1 677 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 ZNF765Q7L2R6 523 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 APTXQ7Z2E3 356 aaKnown RBP20.6■□□□□ 0.89
CPSF7-209ENST00000463244 TIPARPQ7Z3E1 657 aaKnown RBP20.6■□□□□ 0.89
CPSF7-209ENST00000463244 POLNQ7Z5Q5 900 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 NLRP8Q86W28 1048 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 ATPAF2Q8N5M1 289 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 COX14Q96I36 57 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 ZPBPQ9BS86 351 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 FBXO8Q9NRD0 319 aa20.6■□□□□ 0.89
CPSF7-209ENST00000463244 PRRC2CQ9Y520 2896 aaKnown RBP20.6■□□□□ 0.89
CPSF7-209ENST00000463244 A8MU76 341 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 FZD6O60353 706 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 NTRK1P04629 796 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 PYGLP06737 847 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 PDHA1P08559 390 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 IL1R2P27930 398 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 MAN1A1P33908 653 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 ARL4AP40617 200 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 CDH6P55285 790 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 HHEXQ03014 270 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 ABHD18Q0P651 414 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 MARC1Q5VT66 337 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 UNC5BQ8IZJ1 945 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 NSMCE1Q8WV22 266 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 SMIM14Q96QK8 99 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 AGAP2Q99490 1192 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 SARS2Q9NP81 518 aaKnown RBP20.59■□□□□ 0.89
CPSF7-209ENST00000463244 CHMP5Q9NZZ3 219 aa20.59■□□□□ 0.89
CPSF7-209ENST00000463244 TMEM184BQ9Y519 407 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-209ENST00000463244 GP1BBP13224 206 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 ZNF30P17039 623 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 OAS2P29728 719 aaKnown RBP20.58■□□□□ 0.89
CPSF7-209ENST00000463244 PCK1P35558 622 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 SMTNL2Q2TAL5 461 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 NDUFAF2Q8N183 169 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 EXD1Q8NHP7 514 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 APOBEC4Q8WW27 367 aaKnown RBP20.58■□□□□ 0.89
CPSF7-209ENST00000463244 ABHD17AQ96GS6 310 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 CSPG4P5Q96PW8 444 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 TRIT1Q9H3H1 467 aaKnown RBP20.58■□□□□ 0.89
CPSF7-209ENST00000463244 APMAPQ9HDC9 416 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 CNOT8Q9UFF9 292 aaKnown RBP20.58■□□□□ 0.89
CPSF7-209ENST00000463244 MYO6Q9UM54 1294 aa20.58■□□□□ 0.89
CPSF7-209ENST00000463244 PCYT1BQ9Y5K3 369 aaPredicted RBP20.58■□□□□ 0.89
CPSF7-209ENST00000463244 A0A0J9YYE9 177 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 DNAJC6O75061 913 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 STK17BO94768 372 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 TRBC1P01850 177 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 GZMAP12544 262 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 TCF4P15884 667 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 MYL5Q02045 173 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 NFATC2Q13469 925 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 DEFB109BQ30KR1 87 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 CRTC2Q53ET0 693 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-209ENST00000463244 RBM43Q6ZSC3 357 aaKnown RBP20.57■□□□□ 0.88
CPSF7-209ENST00000463244 STARD8Q92502 1023 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 NCSTNQ92542 709 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 RIOK2Q9BVS4 552 aaKnown RBP20.57■□□□□ 0.88
CPSF7-209ENST00000463244 NT5MQ9NPB1 228 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 VPS18Q9P253 973 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 UNC79Q9P2D8 2635 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 TBC1D29Q9UFV1 150 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 ZNHIT2Q9UHR6 403 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 SCINQ9Y6U3 715 aa20.57■□□□□ 0.88
CPSF7-209ENST00000463244 INPP4BO15327 924 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 DLGAP3O95886 979 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 FTLP02792 175 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-209ENST00000463244 CDK11BP21127 795 aaKnown RBP20.56■□□□□ 0.88
CPSF7-209ENST00000463244 SERPINB6P35237 376 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 STC1P52823 247 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 EPHA4P54764 986 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms