RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DENND2DQ9H6A0 471 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ESRP2Q9H6T0 727 aaKnown RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 PPP1R3EQ9H7J1 279 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 EPB41L5Q9HCM4 733 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 POT1Q9NUX5 634 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ARHGEF38Q9NXL2 777 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 WSB2Q9NYS7 404 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 STK39Q9UEW8 545 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 OR14J1Q9UGF5 321 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 IL17BQ9UHF5 180 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 RCOR1Q9UKL0 485 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ACSL5Q9ULC5 683 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CNTNAP2Q9UHC6 1331 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 LY6G6EA0A0G2JKS1 128 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1B0GVM2 712 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 RPS10-NUDT3A0A1W2PQS6 291 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1W2PRQ8 180 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 LNP1A1A4G5 178 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 H0YGN5 161 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ATP2A1O14983 1001 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 PAPSS1O43252 624 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ADAM20O43506 726 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 VNN2O95498 520 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 COL3A1P02461 1466 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 MYBL1P10243 752 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CYP19A1P11511 503 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 PRF1P14222 555 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 HNRNPH1P31943 449 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 STX2P32856 288 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CLCN3P51790 818 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CSNK2A1P68400 391 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 UBXN2AP68543 259 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 AIMP1Q12904 312 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 TNFAIP1Q13829 316 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 KYNUQ16719 465 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 PRTGQ2VWP7 1150 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 MYLK3Q32MK0 819 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 MMEL1Q495T6 779 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF805Q5CZA5 627 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 BMP2KLQ5H9B9 411 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 WASHC2DQ5SRD0 308 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 DCST1Q5T197 706 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ERMARDQ5T6L9 678 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 RPUSD3Q6P087 351 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 FAM122CQ6P4D5 195 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 Q6ZTK2 550 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 KBTBD6Q86V97 674 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 SCYL3Q8IZE3 742 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 SCML4Q8N228 414 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 TMEM199Q8N511 208 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CSNK2A3Q8NEV1 391 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 OR1J2Q8NGS2 313 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 THAP6Q8TBB0 222 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 GPT2Q8TD30 523 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 DUSP19Q8WTR2 217 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ZKSCAN4Q969J2 545 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ERGIC1Q969X5 290 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 SLC25A28Q96A46 364 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 APOLD1Q96LR9 279 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ATXN2Q99700 1313 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 KRTAP1-5Q9BYS1 174 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 RBM38Q9H0Z9 239 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ERVMER34-1Q9H9K5 563 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ZBTB40Q9NUA8 1239 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ACSS1Q9NUB1 689 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 HIF1ANQ9NWT6 349 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ANAPC2Q9UJX6 822 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 ZHX1Q9UKY1 873 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CDC14AQ9UNH5 594 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 R3HDM2Q9Y2K5 976 aaKnown RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 TMEM184BQ9Y519 407 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 MAGED1Q9Y5V3 778 aaPredicted RBP3.06□□□□□ -1.92
HDAC6-212ENST00000461608 CLIC4Q9Y696 253 aa3.06□□□□□ -1.92
HDAC6-212ENST00000461608 LOC102723996A0A087X1L8 192 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 hCG_1809904A0A1W2PP81 198 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1W2PPE2 198 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1W2PR64 198 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1W2PR77 199 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 A8MV72 311 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 H7C0S8 307 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 IFNL4K9M1U5 179 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 M0QZ24 198 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 UBE2CO00762 179 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 HS3ST1O14792 307 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 PPEF2O14830 753 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 GH2P01242 217 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 C21orf33P30042 268 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 HOXD3P31249 432 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 MATR3P43243 847 aaKnown RBP eCLIP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 MSH2P43246 934 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 ABCG1P45844 678 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 AMTP48728 403 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 PGGT1BP53609 377 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 RAD23AP54725 363 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 KRTAP10-6P60371 365 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 SEC61BP60468 96 aaKnown RBP3.05□□□□□ -1.92
HDAC6-212ENST00000461608 SIRPAP78324 504 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 C2orf68Q2NKX9 166 aa3.05□□□□□ -1.92
HDAC6-212ENST00000461608 LRIF1Q5T3J3 769 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms