RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 NFATC4Q14934 902 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PNCKQ6P2M8 343 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DRICH1Q6PGQ1 229 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 NLRP8Q86W28 1048 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HID1Q8IV36 788 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RASGEF1CQ8N431 466 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 IPMKQ8NFU5 416 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DTD2Q96FN9 168 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OXNAD1Q96HP4 312 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GPR63Q9BZJ6 419 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZFYVE1Q9HBF4 777 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HACD3Q9P035 362 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KLQ9UEF7 1012 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KNTC1P50748 2209 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ASPMQ8IZT6 3477 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 A0A087WV48 116 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CES2O00748 559 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 IFNB1P01574 187 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FGF1P05230 155 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HOXC4P09017 264 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PSMB4P28070 264 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TRIM23P36406 574 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FDFT1P37268 417 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ETV3P41162 512 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ABCG1P45844 678 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SRP54P61011 504 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DPTQ07507 201 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 C1orf61Q13536 156 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OASLQ15646 514 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 COL28A1Q2UY09 1125 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 C4orf22Q6V702 233 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 Q6ZVL8 140 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZNF765Q7L2R6 523 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TECPR1Q7Z6L1 1165 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FGF11Q92914 225 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RTP4Q96DX8 246 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 WDR92Q96MX6 357 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LRRC61Q9BV99 259 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 BOCQ9BWV1 1114 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CDH19Q9H159 772 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PHPT1Q9NRX4 125 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TTC7AQ9ULT0 858 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ARID1BQ8NFD5 2236 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP3-207ENST00000461009 USP27XA6NNY8 438 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 YY2O15391 372 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CSO75390 466 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TCEA3O75764 348 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 AGTP01019 485 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MYF5P13349 255 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GM2AP17900 193 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TEAD1P28347 426 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GPR1P46091 355 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SPINT3P49223 89 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PTPRRQ15256 657 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SIRPB2Q5JXA9 342 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CDCP2Q5VXM1 449 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RAET1GQ6H3X3 334 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RBM44Q6ZP01 1051 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TSACCQ96A04 125 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SMIM14Q96QK8 99 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ABCG8Q9H221 673 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FAM83DQ9H4H8 585 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PADI4Q9UM07 663 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SNX12Q9UMY4 172 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OR1A2Q9Y585 309 aa13.18□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SPEGQ15772 3267 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GOLGA6L10A0A0M3HER8 536 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CTAGE9A4FU28 777 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms